AMCG00014154


Basic Information

Item Value
gene id AMCG00014154
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 2893854 ~ 2904687 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014154
ATGGTCTCCACGGCTGGGCCAAACGTGTCCCGGCGAGACAGGGGTGTCGATGAATCTGCGATGCTGGATGTGCTGATAATAGGGGGGGGCCCTCATGCTTTGACCCTGGCCTCGCTGTTAACCAATCCAGGTTGCCGAATACCGCAGCCCAGCTCTGGGGTTCTGGAAGGAGTTGTGTTCAGTAAGAGCTGGTGTAAGAAAGGGAAATCTAAACTCAGAGGAAGACCATCACCTGATGAGCTGTTAGAAACCTTGGACCTTCCCCCATGCCCTCAGTTGCAGTTGAAAGTGGTTGACACCTATGGACAATGGACAACCCTGTGGGAGAAACAGTTTGCAGCTCTGAATATACCTCATCTCCGCTCACATACCCTGGTGCACACAGATCCACTTAACAAGAAAGCCCTGcaggaatttgttttaaagcacgAGCGAACGAACGAACTACACACCCTGAAGGAACAAACTTACATTCAAGATGAAAACGCCTTCTTCAATGACAACCGTCTGGGCAAGAAGGACAAGAAGAAACTTACGTCCAATAGCACGTTAAGGAAAAGCTTGTATTTCAGCTTGCCAGGGACTAAACTCAGTGTGGACTTCTTCAGGGAGCAGGTTTACAGATACCACCTGGAAAGTGTCTTAATCAAAGGCACAGTGGAGAGAATTATGCCAGTCGTAGAGGCCCAGTCCCCACCGTTGCCAGCAGACAGCGAAGGCAAGAGGGCGCAGTACTTCAGAGTGGTGCTGCAGAGTGGAGAGGTGATCGAGACGAAGCAGGTGGTCCTGGCAACGGGTCCCACGCGGGCTCAGATGGCCAACATTCCCGCCTGGGTCAGTGCAATCAGTGAGAGCTACCCAGAGGACAGCCTGCAGCACACCGTGAACCTCCTGCACGGTCAGCATCCCACACAGCAACGGGAAGGAGAGGAACCGGGAATAAAGAGCAGAGTTCCAGTACCACCGTCAGTGTGTCGGAGAGGAGAGAGGCTGATGGTGATTGGAGGAGGCCTGACCAGTGCCCACATTATTTCCATGGCTCTGCAGCAGGGAGCCAGTCACGTGACCTGGGTCATGCGGAAACATTTACAGCTGAAGCAATTTGATGTGGGTGATGTTGAGACTCTAATCGGACGCTACTCCCACATTGAACACGGCATCAAATTGGACGGACTCGCCTATCTCCGCCAGTTTTATAACGAGAGGAGTCTGCACAAGCGTCTGGCAATGATTCACCAAGCCAGAAAGGGGGGTGCGGTCACTCCGGAGGCCTACGCGCAGCTGCAACCCTACATCGGCAGCAGACACTTAACGGTGAAAACCTACTGCCAGGTTTCCGAAGCAAAGTGGTCTTACCGGAATCAGGCATGGGACGTGTCTGTGAACACAAGTGAGAGGTGGTCTGGGGACCGAATCTGGCTAGCCACCGGCTGCAAACTCGATGTGAATCAAGATCCTTTACTCAGCGAAGTCATGAGAGAGTTCCCCATTCAGGTGCTTGATGGCTGGCCTTCAGTCTCTGAGAATCTGCAGTGGTCTCCTGGCTGCGCTCTCTACCTGATGGGGCAATATGCAGCACTTCAGATTGGGCCTCATTCTGTCAACCTGGCTGGAGGTCAGGCGGCCAGTGCACGCATTGCGAGAGACATCCTCAATAAACACAGTGAAGTGGGGGGAGGACAGGCGGCCCCCGACGGACAGGCTGCTGGGAAGTCACGGACGCAGGAGTACATACAGCAGATGCATGGGCTGATGTGGTTGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014154 True 1764 mRNA 0.54 10 2893854 2904687

Neighbor

gene id symbol gene type direction distance location
AMCG00014156 LOC102310267 coding downstream 1632 2880514 ~ 2892222 (-)
AMCG00014153 NA coding downstream 13970 2870461 ~ 2879884 (-)
AMCG00014155 piga,LOC106582142,LOC102779826 coding downstream 25505 2850412 ~ 2868349 (-)
AMCG00014151 NA coding downstream 141859 2745345 ~ 2751995 (-)
AMCG00014150 NA coding downstream 158982 2731531 ~ 2734872 (-)
AMCG00014157 LOC106595857 coding upstream 25927 2930614 ~ 2935152 (-)
AMCG00014160 NA coding upstream 30918 2935605 ~ 2937871 (-)
AMCG00014159 ace2 coding upstream 33860 2938547 ~ 2940833 (-)
AMCG00014158 NA coding upstream 41215 2945902 ~ 2952055 (-)
AMCG00014169 NA coding upstream 280290 3184977 ~ 3195114 (-)
G68077 NA non-coding downstream 88690 2776259 ~ 2805164 (-)
G68078 NA non-coding downstream 91810 2782510 ~ 2802044 (-)
G68076 NA non-coding downstream 123194 2769838 ~ 2770660 (-)
G68073 NA non-coding downstream 127680 2765190 ~ 2766174 (-)
G68070 NA non-coding downstream 135014 2758485 ~ 2758840 (-)
G68124 NA non-coding upstream 124422 3029109 ~ 3032764 (-)
G68162 NA non-coding upstream 322178 3226865 ~ 3228150 (-)
G68224 rbbp7,LOC105893332,LOC100695351,LOC103023991,LOC106520888 non-coding upstream 558748 3463435 ~ 3464792 (-)
G68304 NA non-coding upstream 1052315 3957002 ~ 3957266 (-)
G68324 prps2,LOC108413289 non-coding upstream 1191528 4096215 ~ 4098475 (-)
G68088 NA other downstream 64710 2825562 ~ 2829144 (-)
AMCG00014144 NA other downstream 240607 2641059 ~ 2653247 (-)
AMCG00014134 NA other downstream 351157 2531954 ~ 2542697 (-)
AMCG00014119 NA other downstream 768901 2085941 ~ 2124953 (-)
G67843 NA other downstream 975672 1916727 ~ 1918182 (-)
AMCG00014181 ppef1,LOC105893339,LOC108425737,LOC107695075 other upstream 481070 3385757 ~ 3394754 (-)
AMCG00014228 NA other upstream 2754385 5659072 ~ 5678499 (-)
AMCG00014241 NA other upstream 3154802 6059489 ~ 6108358 (-)
AMCG00014271 NA other upstream 4473401 7378088 ~ 7386984 (-)
AMCG00014276 LOC106575771,LOC106574874,LOC107705522,LOC107584803,LOC105911816,LOC105019730 other upstream 4497465 7402152 ~ 7411890 (-)

Expression


Co-expression Network