Gene
RNA
| Item | Value |
|---|---|
| gene id | G73568 |
| gene name | LOC107575789 |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 35434969 ~ 35842991 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| PREDICTED: receptor-type tyrosine-protein phosphatase zeta-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU91890 | True | 384 | lncRNA | 0.49 | 2 | 35434969 | 35842991 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00014832 | NA | coding | downstream | 254330 | 35172869 ~ 35180639 (-) |
| AMCG00014830 | arglu1,LOC106586866 | coding | downstream | 474720 | 34942975 ~ 34960249 (-) |
| AMCG00014829 | efnb2a | coding | downstream | 503323 | 34910593 ~ 34931646 (-) |
| AMCG00014828 | NA | coding | downstream | 869767 | 34564486 ~ 34565202 (-) |
| AMCG00014826 | NA | coding | downstream | 2000587 | 33127678 ~ 33434382 (-) |
| AMCG00014840 | agpat3,LOC102793782 | coding | upstream | 135215 | 35978206 ~ 35986568 (-) |
| AMCG00014843 | NA | coding | upstream | 219628 | 36062619 ~ 36073308 (-) |
| AMCG00014844 | NA | coding | upstream | 330854 | 36173845 ~ 36332481 (-) |
| AMCG00014847 | NA | coding | upstream | 621463 | 36464454 ~ 36526810 (-) |
| AMCG00014846 | LOC107578620 | coding | upstream | 696827 | 36539818 ~ 36570308 (-) |
| G73548 | NA | non-coding | downstream | 11834 | 35340673 ~ 35423135 (-) |
| G73533 | NA | non-coding | downstream | 74592 | 35275736 ~ 35360377 (-) |
| G73385 | NA | non-coding | downstream | 160231 | 35273610 ~ 35274738 (-) |
| G73381 | NA | non-coding | downstream | 166852 | 35267752 ~ 35268117 (-) |
| G73378 | NA | non-coding | downstream | 176026 | 35257466 ~ 35258943 (-) |
| G73606 | NA | non-coding | upstream | 213005 | 36055996 ~ 36057458 (-) |
| G73609 | NA | non-coding | upstream | 351057 | 36194048 ~ 36194250 (-) |
| G73667 | NA | non-coding | upstream | 631252 | 36474243 ~ 36475948 (-) |
| G73704 | NA | non-coding | upstream | 803068 | 36646059 ~ 36652043 (-) |
| G73722 | NA | non-coding | upstream | 846366 | 36689357 ~ 36730561 (-) |
| G73328 | LOC101154678 | other | downstream | 664990 | 34769583 ~ 34769979 (-) |
| AMCG00014825 | NA | other | downstream | 2315641 | 33070249 ~ 33119328 (-) |
| AMCG00014824 | NA | other | downstream | 2628674 | 32795005 ~ 32806295 (-) |
| G73127 | NA | other | downstream | 2815820 | 32597462 ~ 32619149 (-) |
| AMCG00014816 | NA | other | downstream | 2879024 | 32455306 ~ 32555945 (-) |
| G73604 | pdxk,LOC106574311,LOC105019670,LOC108428208,LOC107676865 | other | upstream | 258367 | 36101358 ~ 36182351 (-) |
| G73612 | NA | other | upstream | 410783 | 36253774 ~ 36254187 (-) |
| AMCG00014845 | NA | other | upstream | 530160 | 36373151 ~ 36393493 (-) |
| G73833 | NA | other | upstream | 1482029 | 37325020 ~ 37325307 (-) |
| G73916 | NA | other | upstream | 1936342 | 37779333 ~ 37783575 (-) |
