AMCG00021397


Basic Information

Item Value
gene id AMCG00021397
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 16474783 ~ 16499645 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021397
CAAAAACGCGTTCCCTAGAGCTGTGTGTCTCTCCGCCCGGGTGTGCATCCCCGCTCTCGctcttatttatgtttgtgaCAGTTCGTGAAAATGGCGAGGCTGAGCGAGCACGGGATCCGTCTGAGCTGCATGAGCCCTTCCTACCTGCACAGTAACTCCACCAGTCACACCTGGCCGTTCAGCGCCGTTGCAGAACTTATAGACAATGCCTGCGACCCGGGTGTCACCGCTAAGCAGATCTGTATTGACGTGGAAAGCCTGAAGGACCAGCTGTGCATCACCTTCACAGACAACGGCAGCGGCATGACCCCCAGCAAACTGCACAAGATGCTGAGtttCGGCTTCACGGACAAGGGTTCCAATAAGACGCACCAGCCCATCGGTGTGTATGGCAACGGGTTCAAGTCAGGGTCCATGCGCCTGGGCAAGGACGCGCTCATCTTCACCAAGAACGGGGGCTGCCTGAGCGTGGGGCTGCTGTCACAGACTTACCTGGAGAGCATTAAGGCACAGGCTGTCATTGTGCCCATCGTGCCTTTCAACCAGCAGAATAAGAACCCGATTGTGACGGAGGACTCAGTGGCCAGCCTGAAGGCAATCCTCTCCCACTCCCTGTTCAGCTCACAGGAGGACCTGCTGCAGCAGTTTGACAGCATCCCCACCAAGAAGGGCACCAGGATCGTCATCTGGAACATCCGCAGGAATAAGGATGGGAAGCCAGAGCTGGATTTCGAGACGGACAAGTATGACATCAGGATGCCGGACCTGCGACCTGAGGAGACGGGGGCAGGAGCCAAGAAAAGGTTCCCAGGACCCATGAGGACTGACCACTGCGTGCCTGAGATGGACTACTCATTAAGGGCATACTGCAGCATTCTGTACCTGAAGCCTCGCACCCAGATCATCTTGCGCCAGAGGAAAGTCCAGTCCAAGCTGGTGGCCAAGAGCCTGGCCAACATTGAGAATGACGTCTACAAACCCAGCTTCATTAACAAGAGAGTGAAGATCACGTTCGGGTTCAACTGCAAGAACAGGGAGCACTGTGGCATCATGATGTACCACAAGAACCGGCTCATCAAGTCCTACGAGAAAGTGGGCTGCCAGATCAAGTCCACCAGCCGTGGGGCAGGAGTCGGTGTCATCGGGGTCATCGAGTGCAACTTCCTGAAGCCAGCACACAACAAACAGGACTTTGAATACACCAAGGAGTACAGACTGACGCTGGCAGCTCTGGGCATGAAGCTGAATGACTACTGgagagagaagaaggagaagaaagcgAAGGAGAAAGCAGCCCGGGCGAAGGCAAAGAAGGAGAAACAGCTGgcggaagaggaggaggaagaggaagaggaggaggacgaggaggaggaggaagaggagattgaCCCTGACCAGCGCTGGGTGCAGTGCGAGGAGTGTCTGAAGTGGAGGAAGATGCCAGTGTGGATGTCGCCTCAGTCTCTGCCCGAGCGCTGGAACTGCAGCCTGCACCCCGACCCCAGGTCAAGGAGCTGCTTGGTTCCAGAGGACCCAGAGGAGAGTGAGGACGAGCTGACACCCAGCTATGAGAAGACCTTCAAAAAACAGGACCCCACCTGGGACAGAAAACGCAGCCGGTCACTGGAGGAGGCGAAGAGGCGGCCTGGCCTGGCCAGAGGAATGTCTGAGCCTTCCAATCACAGCACAGGGAAggtgaaggagaaggaggaggaggaacagaCATCAGAGTACAGCGCCCCCTGTGGCGAGGAGGACCTGCAGGCAGTGTGCAGCAACAAGCGGAAGGCCCCATGGaggcagtgcagtgcagatAAAAAGCTCTGCGCAGGGCTAGAGAGCCCAGCCCTGTCCCACCCCAGGGCCAAATGTGAagaagagaaggaggaagagagggaggaagagaaggaggaggaggaggaagaggaggaagaggagggggggcaGGTGGAGGAGGATGGAtatgaggaggaggatgaggaggaagatGATGGGGAGGAGAACCCCATCGAAGTCACTGTCAAACAGGAGCACAGGAGGACGCCCCCAATGACCGGGAGTTCCCAGAAGCCACTGGCATCACCCACAGCTCCCGCCCCCTCACCAGGCAAGAGGGAGCTGCGCAGGCCCGCGCCCCCCCTCAGCATTTGTGCTGAGGGCATGGACAGGGTGACGCTGTGCCAACGGGTGGCTCAGCTGGAGAGGGAGGCTGACCGGCTGCGTGGGATTCTGGGCACCCCTCCCTTGCCCCGGAGCCCTCTAGCAGAGCCTGGCCCCTCCCCTAGCCCCAGCTCCAGCCCGAGCCTGGAGCACATAACTGACCTGTACCAGCAGGTCACCCAGGAGAGGGAGCTGCTGAGCCAGGGGCTGACGGAGGCGGCAGAGAAGCTGGTGGTCATGTCTGCGGAGAGGGACAAGTACAAGCTGAAGGTGATGGAGCTTCAGCAGGAGAGGACGCGGCTGCAGGAGGAGTGTGAGAAGAGCCAGCAGGAGGTGCTGTTGTTGCGAACCCCCCCCTCGGGAGCAGGTGAGGACATCTACTGGGGCAAGAAGTACGCCAACTTCCAGTACCACGAGCTGGAGACACTGCGGTCCGAACAGGAGCGCCTGCGGATGGAGAACCGGGAACTGGAAGGCCAGCTGCGACAGGCCGAGATCAGTCTGCACCACCGCCGCGACACCCGCGAGCAAAGTACCAGCACCCCCCACGGCTCGGCCGACAGGTACCGCCCTTCACAGCACCCTGTACCCCCCACTCAGGGCCCAGCCAACAGcaTTGCTCTAGATCGCCTTCGTGCCCTGCGGCAGAATGTGGTGAACCTGCTGTCCTCTGTATTGCCCCATCTGGACCTGCAGGGCATCAGCCTGGACACTGGTGACATCGACAACATCCTGGGGCAGGTCATTGAGGCCAACAGGATCTGACCCCTTCCTACCCACCGGGCCTGAACCCTTCCTGACCACCAGGGGCAGAGCAAAGAGACTCCCCCAGCCCCACTCTTGTCCGAGCACCACTTAATGCTCAGCCTCTGCATCAGTAGACCTGCCCCTCCACTCGGGCTCCTCTAGAACAAAAACCTGTGTCACACAATCCTATCTGTGTTTAtggagtgtttattttatttgtgtgtttgtttgtttttgtattatttgttttttttcttttgtttctttcactgcAAGGTCACTGGGGCGCTCGGACTGCAGTCCACAGCATGTGCACTCTCTCGCTTCTCCGCGGAACCCCCCCTGCAGCTTCAGGCTGCATTGCCTGCTGTCTAGTGGCCACTTCCTCAAACGGCACCCTTTGCATGACCTAATTGGCGCATGTCCGTAATGCATAACCCCACAGAGCTGACCAGCCCAAGGCTGCGGTGCGGAGCGTGCGGTGTAGCGGGGTGCATTGTGGTGTATGATCACGTAGAGTAGGGTGGAgtactgcagtgtagtgtaggaTGGGGTATTGTAGTGTAGTGCAAGGTAGGCTACTGTACAGTAGAGTGGAGGATTGTGTGTCTGTTATGGTTTAATTAAGTGGAGAAAGATCACACAAGAGCACACAAGATCTGGGACAGTCCAACAGAGACGGTGGTTGTAGGTTCGTCCCACAGCTTTAGATTTTATAGTGCATGTTTCTATTGATATCTGTAGCAATCTGCAAGTCTGTCTGCAGCATGTGTCCAGTGTGGGCTGGGGAGGGCTGTGCTGTGTATGGCCAGGGCTATGATGGCAAGCAGAAATCAAAGTGCCGACTGCCACCCCTAAGTCAGGATTCACTTGTTCGACCCTGGTGGCCTTCCATCCCGCCCCAGACTTGCACCCAGGACCCCCCCTGCTGTGGAGGTGGACACAAGCCTGCTTCGGCTAAGGAATCCCACTGTACCCTATTCATGTGGGATTTGTCaccagtgtctgtgtgcttcCCGACACTTTGGGGGGAGATGGTTTTGGCAGAAGCTGTGTTGTGCAGAAGCTGTAACGAAGGAGAGGTGCAGTGGGGGACAGCGGGGGGGGAACCTCGGCACAGACACCCACCCGAGGAATCTGCACACCTCCCCAGCCCTGCTACACCTGCAGCCCTGAGCTCCACTGCCCTGCACACAGCAAAGCTCCTGCTGGAGAGAGTGAGctagggggagagagagaaacacagtcTTGCTCagacatatgttttttttttttttaagggactCGCAATGAGAACATATTTTTGGAGGTCTTccaaaaatgaattgaaatgcACAGCAAGCATGGCCAGCACTGCCAAGTCCCCCCTTTCTGTGTTATCGATTTATCATCACTTTTAGCCTgctctcatttaaaaaatatatttttaaggactgttgtaaacaaaatgcaaatggtgTAACTCTTTGCCCTTTTATAATCATCATTGTGAGCAGTTGGACCAGCAAAGAGACTTTGACATGTATATATGAGAATCCCAGTTAAGTGCCATTATTAAGTCACTGTGTCCAGAAAGCTTGTTTACGCCTGAACATTCTGCCTGGAGAATTCCCTGCCTCACACCCCCTCCGCTCTCAGTAGCCGTGCTCACTTACAGTGCTCTGTGTATAGTGGCCACAAGCAGAGcaatagtattttaatgcacattctttttttttcctgtgtgtgtaatttattgtcagttttatatgtacatatatatatacactacctgtcaaaagttttagaacacctccatttttccagttttaattgaaattgaagaagtttaggttaccaaaaactgaaaaataatgtatgtttcagagttatatactacttcctacaccctcttaagcattatttggcagtgttacgcacaagtactgtgcatagaagttaaactgtattcctacaatgcgcacagcgtttgaaagcttattctcttggctaccagcgcatttaattctcaaacacatcagaTTTACCATTTCCATGTCGCccgctgtcattcagagcctgggggtAAACGCGTAGTCTGctgggggggtc

Function

GO: NA

KEGG:

id description
K24135 MORC; MORC family CW-type zinc finger protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021397 True 4998 mRNA 0.54 18 16474783 16499645

Neighbor

gene id symbol gene type direction distance location
AMCG00021394 NA coding upstream 2927 16466707 ~ 16471856 (+)
AMCG00021395 LOC103355350,LOC107387146 coding upstream 40707 16418223 ~ 16434076 (+)
AMCG00021389 NA coding upstream 185175 16288754 ~ 16289608 (+)
AMCG00021386 NA coding upstream 203911 16256465 ~ 16270872 (+)
AMCG00021385 slc25a14,LOC106567890,LOC107697362 coding upstream 241973 16222904 ~ 16232810 (+)
AMCG00021405 NA coding downstream 18925 16518570 ~ 16520363 (+)
AMCG00021398 NA coding downstream 26418 16526063 ~ 16527195 (+)
AMCG00021402 NA coding downstream 32303 16531948 ~ 16535816 (+)
AMCG00021400 cnga2,LOC103395327 coding downstream 42312 16541957 ~ 16545499 (+)
AMCG00021399 nup62,LOC100135786,LOC106603332 coding downstream 50388 16550033 ~ 16555645 (+)
G85674 NA non-coding upstream 182590 16289749 ~ 16292193 (+)
G85623 NA non-coding upstream 304897 16140523 ~ 16169886 (+)
G85552 NA non-coding upstream 552062 15920739 ~ 15922721 (+)
G85507 NA non-coding upstream 719351 15753082 ~ 15755432 (+)
G85497 NA non-coding upstream 898265 15575549 ~ 15576518 (+)
G85746 NA non-coding downstream 48012 16547657 ~ 16549345 (+)
G85757 NA non-coding downstream 69802 16569447 ~ 16569650 (+)
G85758 NA non-coding downstream 72548 16572193 ~ 16572868 (+)
G85760 NA non-coding downstream 84672 16584317 ~ 16584765 (+)
G85763 LOC105929187 non-coding downstream 86672 16586317 ~ 16589411 (+)
AMCG00021373 ubl3b,LOC107658069,LOC107707244,LOC108432919,LOC101472018,LOC107092570,LOC105029324,LOC100692344,LOC103390851 other upstream 401162 16063499 ~ 16073621 (+)
AMCG00021349 mmgt1,tmm32,LOC107658091,LOC107560676,LOC102787804 other upstream 1042419 15428477 ~ 15432364 (+)
AMCG00021292 NA other upstream 2401658 14069330 ~ 14073125 (+)
AMCG00021296 NA other upstream 2441226 14016133 ~ 14033557 (+)
AMCG00021267 timm8a,LOC107593201 other upstream 3037375 13435307 ~ 13437408 (+)
G85764 LOC103366846,LOC106930986 other downstream 90536 16590181 ~ 16592973 (+)
G85787 NA other downstream 156999 16656644 ~ 16714038 (+)
G85869 NA other downstream 498232 16997877 ~ 17004131 (+)
AMCG00021441 NA other downstream 970680 17470325 ~ 17473396 (+)
G86121 NA other downstream 1748845 18248490 ~ 18249686 (+)

Expression


Co-expression Network