Gene
RNA
| Item | Value |
|---|---|
| gene id | G84425 |
| gene name | NA |
| gene type | misc |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030130.1 |
| NCBI id | CM030130.1 |
| chromosome length | 39556810 |
| location | 9416267 ~ 9423419 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0065007 | biological regulation | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU105325 | True | 386 | TUCP | 0.47 | 3 | 9416267 | 9423419 |
| TU105326 | False | 246 | lncRNA | 0.49 | 2 | 9420056 | 9423419 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00021212 | NA | coding | upstream | 76575 | 9324264 ~ 9339692 (+) |
| AMCG00021211 | NA | coding | upstream | 104562 | 9268977 ~ 9311705 (+) |
| AMCG00021197 | cnpy3 | coding | upstream | 405081 | 9004899 ~ 9011186 (+) |
| AMCG00021198 | LOC107665932 | coding | upstream | 441659 | 8953948 ~ 8974608 (+) |
| AMCG00021196 | trpc5,LOC108431879,LOC101077030,LOC108261176,LOC106523850 | coding | upstream | 476325 | 8936978 ~ 8939942 (+) |
| AMCG00021218 | klhl13 | coding | downstream | 180173 | 9603592 ~ 9613134 (+) |
| AMCG00021217 | NA | coding | downstream | 203141 | 9626560 ~ 9629641 (+) |
| AMCG00021219 | NA | coding | downstream | 291118 | 9714537 ~ 9829743 (+) |
| AMCG00021226 | lrch2 | coding | downstream | 523741 | 9947160 ~ 9947483 (+) |
| AMCG00021225 | lrch2 | coding | downstream | 551624 | 9975043 ~ 10004002 (+) |
| G84298 | NA | non-coding | upstream | 827304 | 8587598 ~ 8588963 (+) |
| G84276 | NA | non-coding | upstream | 857849 | 8555961 ~ 8558418 (+) |
| G84244 | NA | non-coding | upstream | 1040229 | 8375331 ~ 8376038 (+) |
| G84196 | NA | non-coding | upstream | 1208889 | 8201838 ~ 8207378 (+) |
| G84155 | NA | non-coding | upstream | 1436441 | 7978217 ~ 7979826 (+) |
| G84477 | LOC108440084,LOC106603334,LOC103024645,LOC105026974 | non-coding | downstream | 441267 | 9864686 ~ 9878867 (+) |
| G84495 | NA | non-coding | downstream | 582692 | 10006111 ~ 10009690 (+) |
| G84535 | NA | non-coding | downstream | 801664 | 10225083 ~ 10225298 (+) |
| G84536 | NA | non-coding | downstream | 804486 | 10227905 ~ 10262453 (+) |
| G84549 | NA | non-coding | downstream | 856569 | 10279988 ~ 10361508 (+) |
| G84301 | NA | other | upstream | 782857 | 8631727 ~ 8633410 (+) |
| AMCG00021180 | NA | other | upstream | 1372968 | 8040170 ~ 8043299 (+) |
| AMCG00021150 | fundc2,LOC106603170,LOC107661711 | other | upstream | 2295030 | 7111997 ~ 7121237 (+) |
| AMCG00021133 | NA | other | upstream | 2869666 | 6544234 ~ 6546601 (+) |
| AMCG00021114 | NA | other | upstream | 5182470 | 4202711 ~ 4233797 (+) |
| AMCG00021240 | LOC107742636 | other | downstream | 1046644 | 10470063 ~ 10719327 (+) |
| G84657 | slitrk2,LOC106611993,LOC106604961,LOC107688026,LOC107588360 | other | downstream | 1539729 | 10963148 ~ 10987174 (+) |
| G84749 | NA | other | downstream | 2651926 | 12075345 ~ 12100707 (+) |
| AMCG00021267 | timm8a,LOC107593201 | other | downstream | 4011888 | 13435307 ~ 13437408 (+) |
| AMCG00021296 | NA | other | downstream | 4592714 | 14016133 ~ 14033557 (+) |
