LOC122357982


Basic Information

Item Value
gene id LOC122357982
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056712.1
NCBI id CM032081.1
chromosome length 26701998
location 25981040 ~ 25991018 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043257692.1
TGTCTGcgatgaagatgaggatgaaAGAGAGCAGCTCGCTGTATGTGGGCGACCTGGAGCCGGACGTGACCGAAGCCATGCTGTTCGAGCGATTCGGGTCGCTCGGTTCGGTTCAGTCGATCCGAGTCTGCAGAGATCGACTCACCTGCCGCTCGCTCGGTTACGCGTACGTCAACTTCGAGCGAGCCGCCGACGCCGAGCGTGCCTTGGACACCATGAACTTTGACCTGATGCGGGAGAAGCCCATGCGTCTGATGTGGTCCCAGAGAGACCCTTCTCTGAGGAAGAGCGGCGTGGGAAACGTCTTCATCAAGAACCTGGAGAAGACCATCGACAGCGAGGCTCTGTACGACATCTTCTCCTCCTTCGGCAACATCCTGTCCTGTAAAGTAAGTGAAGAGCTCCTCGAGACGCTCTGATACGAACACAGAGAGACGCAGGAAGCCGCTGGAAAGGCCATTGAGAAACTGAACGGCGTGTTGATCAATGAGCAGAAAGTGTTCGTGGGACACTTCAAGTCTCAGAAGGAGCGCGAGGCTGAAATGCAGGCCAGAAATAAAGAGTTCACGAACATTTTCATCAAGAACCTCGGGGCGGATGTAGACGACGAGCTGCTGACGGAGATGTTCAGTAAATTCggccggACTCTGAGCGTTCGGGTCATGACGGATGAGAAGGGAAACTCCAGAGGCTTCGGTTTCGCCAGCTTCGAGAATCACAGCGACGCCAAACGAGTGACCACCAGAGCCATCACCGAGATGAACCGTAGGATCGTCGACTCCAAGCCCGTCTACGTGGCTCTGGCTCAGAGGAAGAAGGAGCGCCAGGCTCTGCTCAGGCAGGTGCGGAGTCTGTCTTCTTACAGCAGCGGCCAGCCTCAGGACAGCCCTCAGGTGAACCCCGGTCTCTGGTCCCTGCAGCACATCTATCCTCCTGAGGATCACCATCATCACGGGCTCTTCTGTGAGCAGataaATGAAGCGTTTGCTGTTCTTCAGTCTCATCAGCCGATGGAAGCAGTTCAGATGTCATTCAGTCAAGTCGTCTGAGACAGATATCAATGACCACACACAGACTgactaattcataaaaataatattcatttttaaatagtaattcaGTGTCTATTACAGATatcttacaaatattttattttatatatatacattttttcaagttTGCTTTTAGCaaggaatatttatttaatattttactgcatgttgtgttttaaCCTGTGcaataaaaagattttgtcACTAAATACAAACAGTTCACGGGGCACTGCTGTTTATCTATTTCAGTTTCCTTTATTGACATGACGGTTTACATGCAATAATActaaaccattaaaaacaatccattaatatatatgtacacaaatgcaaatgataCTTTAATACAATACAAGCTTtattaatgcaatgtgttttttttgtctcaaaGAAATGTACAACATATAATGcagacaaaatataaaagaaataaaaaaagaaataaagagagtAATTAATTGCACATCATAGCtgagatgtatttttattacaagaAAACGGCAACTGCTGCcactggataaaaaaaaaggtcattgaGATTTTTTCTCCTAAATTCTGAGTTATATCTAACACctttttcagtgcttttaaTGCAACCTATTATAacctattataaataaaaatgattgattgatttttgcGTTATTTCCCAGAATAGcccttttaatgtttaatgccgTGGTGTAAACGATCTTTCATCTGGTTGCGAAttgatatataatgtattaaaccAATGATATGGCATCGGGcagattgttttatataattcatatatgaCCTTCATGAAAACCCATCCGCGACCTTTACGTCCggtcttatatatttttttcgtGTATCGCGCTACTCTTATTATAGCAGCCCGCGGACTCTTATTCTGCTCTTACGTAAAAATATAAAGGAAACCCACGCAACATCCGGCGAGGACGCCTTCTTATCAGAGCCGTACTTCCGCTTCTCTCCCCCTACCTTGTGCGGTGCGAGAGAGAGCGCGTGTGCCTCAGAGCCTCGGCACACATCTTAtataaaaaatcaaaaatacaaaaaaaaatcacaaaacagaaaaaaataccaaCAAAAAATCAACTTTTATTACCGAACACCTCGGTGAGGCAGGATTCCGCGGACGGGTTTGAGGAGTTTAATCGCAGGGCAGCACCGCAGTAGGCCTGAGGAGATTTTAATCATCGATACCGCCGAAACATCGACGCCGAATCGGTACCGAACGCG

Function

GO:

id name namespace
GO:0007507 heart development biological_process
GO:0000166 nucleotide binding molecular_function
GO:0003723 RNA binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043257692.1 True 2279 mRNA 0.44 9 25981040 25991018

Neighbor

gene id symbol gene type direction distance location
LOC122357971 phldb3,LOC107565285,LOC107737291 coding upstream 558 25957664 ~ 25980482 (+)
ethe1 ethe1 coding upstream 26340 25948216 ~ 25954700 (+)
LOC122357996 NA coding upstream 33026 25944602 ~ 25948014 (+)
LOC122357978 LOC107565302 coding upstream 36954 25936634 ~ 25944086 (+)
drd2l drd2l,LOC107673327,LOC107738867,LOC107565303,LOC108431000,LOC107724766 coding upstream 44790 25919266 ~ 25936250 (+)
nr0b2a LOC107738278,LOC107570854,LOC107673326,LOC107697581,LOC107555404,LOC107737292 coding downstream 12902 26003920 ~ 26006046 (+)
LOC122357988 LOC107730291,LOC107673329,LOC107570855,LOC107697582,LOC107745168,LOC792958 coding downstream 77909 26068927 ~ 26074927 (+)
azi2 LOC107673336,LOC107745144,LOC107570847,LOC107570057,LOC107697570 coding downstream 85887 26076905 ~ 26088981 (+)
eomesb eomes,LOC107730287,LOC107673324,LOC107745170,LOC107697593,LOC107570058 coding downstream 125197 26116215 ~ 26121752 (+)
LOC122357542 ttc24 coding downstream 164621 26155639 ~ 26166583 (+)
G102286 NA non-coding upstream 86737 25803612 ~ 25894303 (+)
LOC122357999 NA non-coding upstream 148795 25830215 ~ 25832245 (+)
G102284 gpc2,LOC107716510,LOC107665619,LOC107573391 non-coding upstream 180849 25799205 ~ 25800191 (+)
G102212 NA non-coding upstream 223547 25757175 ~ 25757493 (+)
G102209 NA non-coding upstream 228904 25751779 ~ 25752136 (+)
G102334 wdtc1,LOC107570846,LOC107673335 non-coding downstream 47558 26038576 ~ 26040075 (+)
G102335 NA non-coding downstream 56032 26047050 ~ 26056104 (+)
G102341 NA non-coding downstream 67145 26058163 ~ 26058439 (+)
G102344 NA non-coding downstream 94362 26085380 ~ 26090260 (+)
G102348 NA non-coding downstream 102827 26093845 ~ 26126060 (+)
LOC122358267 LOC107593202,LOC107740141,LOC107680337,LOC107554835,LOC108268827,LOC105904295 other upstream 921840 25057752 ~ 25059200 (+)
G102017 LOC107680957,LOC107593209,LOC107740154,LOC100534741 other upstream 1764277 24216243 ~ 24216763 (+)
tmem35 tmem35a,tmem35,LOC107680989,LOC107740187,LOC107724834,LOC107688707 other upstream 1891518 24086724 ~ 24089522 (+)
nitr14b NA other upstream 2008791 23970152 ~ 23972249 (+)
neil3 neil3 other upstream 3392507 22584190 ~ 22588533 (+)
G102332 wdtc1,LOC107738793,LOC107673335 other downstream 41961 26032979 ~ 26035638 (+)
gnrhr3 LOC107567517,LOC107673322,LOC108436550,LOC105908885 other downstream 177540 26168558 ~ 26175734 (+)
khdc4 kiaa0907,LOC107570803,LOC107565361,LOC107679549 other downstream 383315 26374333 ~ 26383784 (+)
LOC122357543 vps13b,LOC107570792,LOC107671824 other downstream 410509 26401527 ~ 26429629 (+)

Expression


Co-expression Network