fbxo43 (fbxo43,LOC107739836)


Basic Information

Item Value
gene id fbxo43
gene name fbxo43,LOC107739836
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056712.1
NCBI id CM032081.1
chromosome length 26701998
location 26395624 ~ 26400583 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043257889.1
ACCATAGCAACAATAACCGACTCAGGCTGCCAGAATGTAAAGCTAATTACCAAACCGTTTCCTAATTACAAACCGGTCTGAACGGCGGAAGATGCACAACACTGAAGCTTTTAAGACCTTTCTGACAGAAACTTTCCATACTGCACTCCTAGGTTCATTGAGCGTTTACCAAAGATAATGGAGGTGAAGTCTGGGAAGCATCAGGTGGGCTCGGTTAACGGGCCAAAGCGGGAAGCTACCGTATCGTTATCCTGGTGCGAGACTCCGAAGTTGATCAGGAAGGATGCTTCGCTCCGCCGTCGCCTGCTCGTCTCTCGCTCCTCTTCTGAAGCTACGCCTGGAGACGTCTCCAGAGATCACCTGACCCGCGAGACCTTCGACTCTCCAGACCTCACCCCGACCGGGCCTTTGTCTTACAGCACTTTAAAAGCGGACGATTTTGTGTTCTCCTGTCGCAAGCGGCGTCTCCTGTTCTCCCAGGTCATCACATCCACTCTGGAGACCGGCAGGAGCGGCGTTCACTTGAGCCCGATGCCATTCCAGAACCAGGCCCTCGCTGAGCCGGATCTGGATGAGAGCATCATAGCCGGTCTCTCCATCTCTCCACAAACCGACGACTTCACGCCGCTGACCGCCAAGGCCTTCCGCTCGCCCGAGAGAGCAGACACGTCCTCCCTCACGCCCGCCTCCGAGGACAGCGGCTTCAGCTCGTTGGGTCTGGATAAATCGCACGACTCCTCGGTGGACCACGACGGCTCCTTCCAGGAGCTGGTGCTGCCGTCGGGTTCTTGCGGGAGAGACAAGAGACGCTCGCGGCTGGAGAGACAGCGCAGACTGTCCACGCTCCGAGAGGGAGGCTCGCAGTCGGAGGACGGGCCCAAGAGCCAGCGCTTTGAGACTCGCGCGAGCAAAGACGAGGTGTTTCTGGACGGGACTCCGCTGAGCGCCGTCACGCTGAAGATGCAGGACCTGTCTCTGACCCCGGCGCTGCAGGCCGTTCACGCCATTAGCCTTCGTGGCTCGCAGAAGACCAGTTTAGAGGAGCTGCTCCGAGACGGGCCCGTCGCTACCAGCCTGCCGCTCGCGGGACTCATCGGACGAAAAATGGGCCTCGACAAGGTGGACGTCATCTCAGAGCTGAGGATGAGAAACCTGAGACACGTGCTAGCGGTTATCTTGAGTCTCCTGTCTGCCGCTGAGCTCTACAGGTTTGGACAGGTGTCTGATGACTGGAACGACGTCGTCTCAGAAGATAAGAAAGCTGCTCACAGGAGAAGAAGCCACATCCGAGAGCTCAAGATCACACTGGAGGGAGGCAGAGCGGCTCATGTTCCTGATGCAGACACCAGGTCAGCGCTGGCGTGCCGCTCGGCTCTGGGCAGTGTGCAGGCTCAGGCCCGGacgccccacacacacacgccctgCACCCCGACCCAGACCAGCTCCAAGCGCATGCACTTCCTGCAGgtggcTGAGACTCTGCTGAGGGACGAGTATCTGCGTCCGTGTCCTCGCTGTGAGCGTCCGGCGCGCTGTCACGGTCTCCGGGGCGAGGGTCAGTGCAGCTGGAGCGGCTGCAGCTTCCGCTTCTGTCTGGCCTGTTCCTGCCCGCTCCACGGATCCAGAGACTGTGCTCATCTGTCTGCCAAGCGCCGGAGCAAGAGAGACGTGCTGCCCGGCAGCGCTCAGAGCAAACGTAACGTCCGCCgcctctgagagagagagagagcgcgtgtgtgtgtgtgtgtgagagagtgttttTAATGATGAACTTCTCATGAGTTCTGCACTTGTGTACAGCAGTCATCTCGGTCCTGTGTTTTTGCACGTTTGTACATATTGCTCATTACATGCttgtttttatacattgttttaaataaagcccTTTTTTTTACCTGTGAATAGAAGAGAACCCTGTC
>XM_043257891.1
TGGAGCCTCACTGACCCgctgctccctctctctctctctctctctctctctgagcggCAGCAGCATGACTCTCTGATCAAACACGACACTCCTAGGTTCATTGAGCGTTTACCAAAGATAATGGAGGTGAAGTCTGGGAAGCATCAGGTGGGCTCGGTTAACGGGCCAAAGCGGGAAGCTACCGTATCGTTATCCTGGTGCGAGACTCCGAAGTTGATCAGGAAGGATGCTTCGCTCCGCCGTCGCCTGCTCGTCTCTCGCTCCTCTTCTGAAGCTACGCCTGGAGACGTCTCCAGAGATCACCTGACCCGCGAGACCTTCGACTCTCCAGACCTCACCCCGACCGGGCCTTTGTCTTACAGCACTTTAAAAGCGGACGATTTTGTGTTCTCCTGTCGCAAGCGGCGTCTCCTGTTCTCCCAGGTCATCACATCCACTCTGGAGACCGGCAGGAGCGGCGTTCACTTGAGCCCGATGCCATTCCAGAACCAGGCCCTCGCTGAGCCGGATCTGGATGAGAGCATCATAGCCGGTCTCTCCATCTCTCCACAAACCGACGACTTCACGCCGCTGACCGCCAAGGCCTTCCGCTCGCCCGAGAGAGCAGACACGTCCTCCCTCACGCCCGCCTCCGAGGACAGCGGCTTCAGCTCGTTGGGTCTGGATAAATCGCACGACTCCTCGGTGGACCACGACGGCTCCTTCCAGGAGCTGGTGCTGCCGTCGGGTTCTTGCGGGAGAGACAAGAGACGCTCGCGGCTGGAGAGACAGCGCAGACTGTCCACGCTCCGAGAGGGAGGCTCGCAGTCGGAGGACGGGCCCAAGAGCCAGCGCTTTGAGACTCGCGCGAGCAAAGACGAGGTGTTTCTGGACGGGACTCCGCTGAGCGCCGTCACGCTGAAGATGCAGGACCTGTCTCTGACCCCGGCGCTGCAGGCCGTTCACGCCATTAGCCTTCGTGGCTCGCAGAAGACCAGTTTAGAGGAGCTGCTCCGAGACGGGCCCGTCGCTACCAGCCTGCCGCTCGCGGGACTCATCGGACGAAAAATGGGCCTCGACAAGGTGGACGTCATCTCAGAGCTGAGGATGAGAAACCTGAGACACGTGCTAGCGGTTATCTTGAGTCTCCTGTCTGCCGCTGAGCTCTACAGGTTTGGACAGGTGTCTGATGACTGGAACGACGTCGTCTCAGAAGATAAGAAAGCTGCTCACAGGAGAAGAAGCCACATCCGAGAGCTCAAGATCACACTGGAGGGAGGCAGAGCGGCTCATGTTCCTGATGCAGACACCAGGTCAGCGCTGGCGTGCCGCTCGGCTCTGGGCAGTGTGCAGGCTCAGGCCCGGacgccccacacacacacgccctgCACCCCGACCCAGACCAGCTCCAAGCGCATGCACTTCCTGCAGgtggcTGAGACTCTGCTGAGGGACGAGTATCTGCGTCCGTGTCCTCGCTGTGAGCGTCCGGCGCGCTGTCACGGTCTCCGGGGCGAGGGTCAGTGCAGCTGGAGCGGCTGCAGCTTCCGCTTCTGTCTGGCCTGTTCCTGCCCGCTCCACGGATCCAGAGACTGTGCTCATCTGTCTGCCAAGCGCCGGAGCAAGAGAGACGTGCTGCCCGGCAGCGCTCAGAGCAAACGTAACGTCCGCCgcctctgagagagagagagagcgcgtgtgtgtgtgtgtgtgagagagtgttttTAATGATGAACTTCTCATGAGTTCTGCACTTGTGTACAGCAGTCATCTCGGTCCTGTGTTTTTGCACGTTTGTACATATTGCTCATTACATGCttgtttttatacattgttttaaataaagcccTTTTTTTTACCTGTGAATAGAAGAGAACCCTGTC

Function

symbol description
fbxo43 Predicted to enable metal ion binding activity. Predicted to be involved in negative regulation of meiotic nuclear division and regulation of mitotic nuclear division. Predicted to be active in nucleus. Orthologous to human FBXO43 (F-box protein 43).

NR:

description
PREDICTED: F-box only protein 43

GO: NA

KEGG:

id description
K10318 FBXO43, EMI2; F-box protein 43

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043257889.1 True 1919 mRNA 0.58 5 26396167 26400583
XM_043257891.1 False 1862 mRNA 0.59 5 26395624 26400583

Neighbor

gene id symbol gene type direction distance location
zbtb7b LOC107679557,LOC107739838,LOC107565362 coding upstream 22046 26349459 ~ 26373578 (+)
LOC122358162 LOC107573903,LOC107570793,LOC107745159,LOC108436101,LOC102786116,LOC103364950 coding upstream 48676 26328014 ~ 26346948 (+)
pklr pklr,LOC107698187 coding upstream 69861 26311827 ~ 26325763 (+)
LOC122357920 LOC107570796,LOC107698185,LOC107745157 coding upstream 84550 26301322 ~ 26311074 (+)
clk2b LOC107739840,LOC107679560,LOC107573901 coding upstream 102240 26281508 ~ 26293384 (+)
LOC122357952 nipal2,LOC107731686,LOC107594621,LOC107705020 coding downstream 143334 26543917 ~ 26548675 (+)
fzd6 fzd6,LOC107704794 coding downstream 172053 26572636 ~ 26579615 (+)
LOC122357544 crtc3,LOC107600472 coding downstream 192035 26592618 ~ 26604854 (+)
LOC122357545 LOC107691856,LOC107675386,LOC107572995 coding downstream 208147 26608730 ~ 26621528 (+)
G102423 spag1,LOC107739837,LOC107565360 non-coding upstream 6925 26387946 ~ 26388699 (+)
G102385 NA non-coding upstream 118074 26220234 ~ 26277550 (+)
G102403 NA non-coding upstream 125964 26266474 ~ 26269660 (+)
G102393 NA non-coding upstream 158905 26234882 ~ 26236719 (+)
G102348 NA non-coding upstream 269564 26093845 ~ 26126060 (+)
G102405 vps13b,LOC107671824 non-coding downstream 36826 26437409 ~ 26441594 (+)
G102439 vps13b,LOC107671824 non-coding downstream 44734 26445317 ~ 26446288 (+)
LOC122357364 NA non-coding downstream 165590 26566173 ~ 26568442 (+)
G102492 NA non-coding downstream 207100 26607683 ~ 26623023 (+)
khdc4 kiaa0907,LOC107570803,LOC107565361,LOC107679549 other upstream 11840 26374333 ~ 26383784 (+)
gnrhr3 LOC107567517,LOC107673322,LOC108436550,LOC105908885 other upstream 219890 26168558 ~ 26175734 (+)
G102332 wdtc1,LOC107738793,LOC107673335 other upstream 359986 26032979 ~ 26035638 (+)
LOC122358267 LOC107593202,LOC107740141,LOC107680337,LOC107554835,LOC108268827,LOC105904295 other upstream 1336424 25057752 ~ 25059200 (+)
G102017 LOC107680957,LOC107593209,LOC107740154,LOC100534741 other upstream 2178861 24216243 ~ 24216763 (+)
LOC122357543 vps13b,LOC107570792,LOC107671824 other downstream 944 26401527 ~ 26429629 (+)

Expression


Co-expression Network