G63134 (si:dkey-16n15.6,LOC107667993,LOC107549944,LOC108442380,LOC105898899)


Basic Information

Item Value
gene id G63134
gene name si:dkey-16n15.6,LOC107667993,LOC107549944,LOC108442380,LOC105898899
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 11667166 ~ 11667480 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU93477
GATCGAAACAGGTCGGAGAAGGGAGGCGTGCAGGGGATGACATTCAGCGCACCCATGGTCTCCAGAATTCCACTCTGTAGTCCACAAAGGACCAGGATGACAATGATGCAAATAAACTTGGCACGAAGACCATATCCAGGCAAAGCCTTTTTTGTGGCTTTATAAAAAAGCAGGTAGCCATAGAACGACAGAAAGGTCGATATGGCAATGATGGCATTGACATACATGTTGAGATTAACTGAATTCACCTAAGGGAAACAGATTATGAAGAGTCACATAATGTAGTtcaaaaaataagtcaaatctATTTttcaa

Function

symbol description
si:dkey-16n15.6 Predicted to be located in membrane. Predicted to be integral component of membrane.

NR:

description
PREDICTED: LOW QUALITY PROTEIN: organic solute transporter subunit alpha-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU93477 True 315 lncRNA 0.42 1 11667166 11667480

Neighbor

gene id symbol gene type direction distance location
nol4la nol4la,LOC107549982,LOC107731219,LOC107745834,LOC107680239,LOC107550513,LOC107668103,LOC108412512,LOC103039117 coding downstream 51895 11579162 ~ 11615271 (-)
ptk6a ptk6,LOC107731218,LOC107668051 coding downstream 91953 11569548 ~ 11575213 (-)
si:dkey-70p6.1 LOC107731205,LOC107668067,LOC107745762,LOC107549481,LOC107549992 coding downstream 163134 11481644 ~ 11504032 (-)
emilin3a LOC107668027,LOC107731182,LOC107549958,LOC107550125,LOC107695222,LOC107745820 coding downstream 215720 11445273 ~ 11451446 (-)
magixa magixa,LOC107731248,LOC107668068,LOC107549995,LOC107695301 coding downstream 274495 11351304 ~ 11392671 (-)
gpr173 gpr173,LOC107731146,LOC107678674,LOC107549585,LOC107549979,LOC107745752 coding upstream 7794 11675274 ~ 11683625 (-)
wasb LOC107731288,LOC107668059,LOC107745750,LOC107549977,LOC107678704,LOC107549603 coding upstream 75659 11743139 ~ 11747881 (-)
slc38a5b slc38a5b,slc38a5,LOC107668060,LOC107549975,LOC107731265,LOC107745748,LOC107678718,LOC107549617 coding upstream 82116 11749596 ~ 11764650 (-)
trnaf-gaa_1 NA coding upstream 129650 11797130 ~ 11797202 (-)
LOC122350200 LOC107731172,LOC107668058,LOC107549973 coding upstream 130288 11797768 ~ 11801654 (-)
G63127 NA non-coding downstream 2392 11663435 ~ 11664774 (-)
G63120 NA non-coding downstream 15262 11648509 ~ 11651904 (-)
LOC122350252 NA non-coding downstream 45961 11620447 ~ 11621205 (-)
G63076 NA non-coding downstream 105533 11560987 ~ 11561633 (-)
G63075 NA non-coding downstream 109887 11554050 ~ 11557279 (-)
G63254 LOC106565120 non-coding upstream 153804 11821284 ~ 11823244 (-)
G63304 LOC107549947,LOC107731153,LOC107668018,LOC107591857,LOC107745734 non-coding upstream 188265 11855745 ~ 11856062 (-)
G63344 NA non-coding upstream 349246 12016726 ~ 12017351 (-)
G63347 NA non-coding upstream 352231 12019711 ~ 12019953 (-)
G63350 NA non-coding upstream 355035 12022515 ~ 12022753 (-)
G63095 NA other downstream 51241 11562278 ~ 11615925 (-)
LOC122350269 LOC107549994,LOC107731173,LOC107745767,LOC107695299,LOC107668028,LOC560461,LOC107549455 other downstream 321178 11284354 ~ 11345988 (-)
smim1 smim1,LOC107668050 other downstream 497693 11131670 ~ 11169473 (-)
LOC122349915 nphp4,LOC107550077,LOC107695281 other downstream 535928 11096140 ~ 11131238 (-)
cep104 cep104,LOC107668088,LOC107745778 other downstream 676431 10973305 ~ 10990735 (-)
G63274 nt5dc2,LOC107731170,LOC107549943,LOC107668043,LOC107550186,LOC107678756,LOC107745746 other upstream 110791 11778271 ~ 11779251 (-)
prok1 prok1,LOC107680267,LOC107711938,LOC107731240 other upstream 383877 12051357 ~ 12054530 (-)
G63385 NA other upstream 596214 12263694 ~ 12264533 (-)
kcnq2a LOC107679259,LOC107668096,LOC107731192,LOC107550457,LOC108442249,LOC108265949,LOC107711924 other upstream 674680 12342160 ~ 12363104 (-)
foxp3a foxp3a,si:ch211-167b20.8,LOC107669635,LOC107731227,LOC107550508,LOC107711972,LOC107679368,LOC107591799,LOC107591800 other upstream 821717 12489197 ~ 12504153 (-)

Expression


Co-expression Network