G63274 (nt5dc2,LOC107731170,LOC107549943,LOC107668043,LOC107550186,LOC107678756,LOC107745746)


Basic Information

Item Value
gene id G63274
gene name nt5dc2,LOC107731170,LOC107549943,LOC107668043,LOC107550186,LOC107678756,LOC107745746
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 11778271 ~ 11779251 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU93692
GCAAATGTAAATCAACATGTTTATATGGCATTAAGATGAAAGTTGTCTTTCTCGGACCTTGTAGTGCTGAACGAGAAACTCTCGCGCCTTGTTGTATATCATCTCGTCCAGCGCGCTGGAATAGAGCGCGAGCGTGTAATCGTAGTCAAAGCCGTAGATGTCCACCTCTTCCAGATTCACCTCGTTGTTGGCATAGATGGTGGAAGGGTTCAAAAGATTGCACACCCCAGGAGGAATCAAATCTCGTTGTATCTCGCCCACAAGTACGTTTTATTGTTGATCTTTGGGGCCGTGGATGAGAAAGCCCTGCCAGATTTGGTAAGAGACTCCTTGCCCACGATCTGATGTCTGTGCGACGTGACCGGGGCCGCGACAGGGTTATGGTTAGCTGCTAGATTTCTCGTCGGTCCACAGTTGTGTCCATCTTTGCAGCAGTTCTGTCCGTTCATTGTTGCACCAGCCGAGGCGAAGCTTCCACAGGCAAAAGCAGGAATATTCAATCCTGCACACAGCGAAACTCTGCGTGCGGCGCTTCTTTGCCACACTGCGTTACTTAAGCTGCCTATTTTTTTGCAAGCCATGTTTCAACTGAACCTACAAAGTTGTTTACTTCTTTCATTCGCACTTGCCCCGCGTGTTCAGTAAGATCGCTTCTGTGAGAACTGATACAGC

Function

symbol description
nt5dc2 Predicted to enable 5'-nucleotidase activity. Is expressed in several structures, including immature eye; margin; paraxial mesoderm; tail bud; and yolk syncytial layer. Orthologous to human NT5DC2 (5'-nucleotidase domain containing 2).

NR:

description
PREDICTED: 5'-nucleotidase domain-containing protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU93692 True 672 TUCP 0.49 2 11778271 11779251

Neighbor

gene id symbol gene type direction distance location
slc38a5b slc38a5b,slc38a5,LOC107668060,LOC107549975,LOC107731265,LOC107745748,LOC107678718,LOC107549617 coding downstream 13621 11749596 ~ 11764650 (-)
wasb LOC107731288,LOC107668059,LOC107745750,LOC107549977,LOC107678704,LOC107549603 coding downstream 30390 11743139 ~ 11747881 (-)
gpr173 gpr173,LOC107731146,LOC107678674,LOC107549585,LOC107549979,LOC107745752 coding downstream 94646 11675274 ~ 11683625 (-)
nol4la nol4la,LOC107549982,LOC107731219,LOC107745834,LOC107680239,LOC107550513,LOC107668103,LOC108412512,LOC103039117 coding downstream 163000 11579162 ~ 11615271 (-)
ptk6a ptk6,LOC107731218,LOC107668051 coding downstream 203058 11569548 ~ 11575213 (-)
trnaf-gaa_1 NA coding upstream 17879 11797130 ~ 11797202 (-)
LOC122350200 LOC107731172,LOC107668058,LOC107549973 coding upstream 18517 11797768 ~ 11801654 (-)
inavaa si:ch211-163l21.4,LOC107731290,LOC107745811,LOC107678807,LOC107667997 coding upstream 48871 11828122 ~ 11837390 (-)
zgc:195245 zgc:195245,LOC107668117,LOC107549966,LOC107731284 coding upstream 59042 11838293 ~ 11840601 (-)
c8h1orf194 LOC107731283,LOC107668109,LOC107549965 coding upstream 61930 11841181 ~ 11842852 (-)
G63134 si:dkey-16n15.6,LOC107667993,LOC107549944,LOC108442380,LOC105898899 non-coding downstream 110791 11667166 ~ 11667480 (-)
G63127 NA non-coding downstream 113497 11663435 ~ 11664774 (-)
G63120 NA non-coding downstream 126367 11648509 ~ 11651904 (-)
LOC122350252 NA non-coding downstream 157066 11620447 ~ 11621205 (-)
G63076 NA non-coding downstream 216638 11560987 ~ 11561633 (-)
G63254 LOC106565120 non-coding upstream 42033 11821284 ~ 11823244 (-)
G63304 LOC107549947,LOC107731153,LOC107668018,LOC107591857,LOC107745734 non-coding upstream 76494 11855745 ~ 11856062 (-)
G63344 NA non-coding upstream 237475 12016726 ~ 12017351 (-)
G63347 NA non-coding upstream 240460 12019711 ~ 12019953 (-)
G63350 NA non-coding upstream 243264 12022515 ~ 12022753 (-)
G63095 NA other downstream 162346 11562278 ~ 11615925 (-)
LOC122350269 LOC107549994,LOC107731173,LOC107745767,LOC107695299,LOC107668028,LOC560461,LOC107549455 other downstream 432283 11284354 ~ 11345988 (-)
smim1 smim1,LOC107668050 other downstream 608798 11131670 ~ 11169473 (-)
LOC122349915 nphp4,LOC107550077,LOC107695281 other downstream 647033 11096140 ~ 11131238 (-)
cep104 cep104,LOC107668088,LOC107745778 other downstream 787536 10973305 ~ 10990735 (-)
prok1 prok1,LOC107680267,LOC107711938,LOC107731240 other upstream 272106 12051357 ~ 12054530 (-)
G63385 NA other upstream 484443 12263694 ~ 12264533 (-)
kcnq2a LOC107679259,LOC107668096,LOC107731192,LOC107550457,LOC108442249,LOC108265949,LOC107711924 other upstream 562909 12342160 ~ 12363104 (-)
foxp3a foxp3a,si:ch211-167b20.8,LOC107669635,LOC107731227,LOC107550508,LOC107711972,LOC107679368,LOC107591799,LOC107591800 other upstream 709946 12489197 ~ 12504153 (-)
zmynd12 zymnd12,LOC107591768,LOC107711949,LOC107679700 other upstream 1206403 12985654 ~ 13083372 (-)

Expression


Co-expression Network