LOC122350012


Basic Information

Item Value
gene id LOC122350012
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 13558881 ~ 13561981 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246202.1
tctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctccctccctccctcccttcctTTCAAAAGCAGTGTTCTTCTGGTAACTGATGAAACATACAAGTGAGAGTCTGTGAGCCCATTTTATCGTTATGTTTTTCATGCTGTATTTGGATATATAGAGAATATCTTGCTTGAAGAGAATGTGATAAATTACAAAGAATGAAAGTCCATCTAAAGATTCTCTCTGTTTTTACagTTATGACTGGTGTGTTGATGAAGTCTGGAAATGTTTATGAAGTAACGGTGGGTGAAACAGTGGAGATCAGATGTTCATATCCAGAAGACCATAAATATACACCCAAGTACTTTTGCCGTCATCCCTGTAAATCATCTGAAcatgttttgattaaaagtgaaaaggTTGATCAGGTCGACTCAGCTGGAAGATACtctttgattaatattgtgAATGGGCTGTTCTTTTCTGTAACCATCAAACATCTCAAGCTCACAGACTCTGGTGTTTATTACTGTGGACTTGATCAATGGTTCAGAGACACACTGAAGAAAGTTGTTCTCTCTGTCTATCCAGCTCCCGTGAACGGATCTACACACAcctctgaaaacacacatgtAACGTCAACATGGACAACAGCACTCACCTGGACAGGAACATCCACCTCTCTCTCAGATAAATCTAGTCCGTATGAGCAAGTCTCTGCAGCATCGCCAACTGTCCAATCAAAGGGAATGACAATACTGGATGACTTtgtcagcGTGCCTGTGGTTTGTGCAGGTGTTCTGGTGTTGCTGGTGTTTGGGGTTCTTGTGCCTTTAATGTCTTTCTGGAGGAAAACAGATTTCAAGTCCACATGTCTGAAATCAGCTGTTCCTGAAACTGAAACAGTTCAAGATTCACCAGATCTCAACCAGGACTCCCAGACTGTATACAATGTCAATCACCTCTATGAAGAAATTGTAAACGAGTACAGTCTGTCTGGACCAGCTAGAGATGGCGATTGTTCTGTAGTATATTCCACTGTGCAGCCTTGTGATCCTGCTTCTCAGAATGACGAGAACACATTGTATTCACTTATCACCCAGCACTGAGAAAACTGACTAGATCACTGTCATTCTCTCACTCCTAAGACCCTGCTGAAACGGTGCACGTGAAAAGAAAACACCCCCTAACATCGGTGGAGGGTCTGACATGTGGGTCGGGCTGTGGAATTAAAGTGAAGCtgagaaaatgtgtatttgcttaacagattgtgttttttctttgtctgaCTAAACTTTTAAAGATCCATGGTGTTTTAAACCTTTTTGTCATTTAGACAGATGGTGTGTATTATTATGAGACtttattttcttcttgttttttcttgtttttttccgGTCTAATTTTCTTCTGAGAGGAATAGTcaaatatagattatttttttacatgaattaaaataaaagaattgttTGATGCCCGTGACTTAGTTTGGAATAAAAAGCTGTTCAAATTAGAGTGGGCAAGACCATTCTGATAAAATCTTGTATATAATTTGTGTGATATTTGTGTAGACTGAAAACTGTAAACAGcgctaataaaaatatttttatccaaA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246202.1 True 1628 mRNA 0.39 7 13558881 13561981

Neighbor

gene id symbol gene type direction distance location
LOC122350013 NA coding downstream 418 13552468 ~ 13558463 (-)
rap1aa rap1aa,rap1a,LOC107594522,LOC107679791,LOC107556321,LOC107751450,LOC101074250 coding downstream 7482 13545306 ~ 13551399 (-)
ddx20 ddx20,LOC107669638,LOC107751451,LOC107594523,LOC107711848,LOC107679786,LOC107556298 coding downstream 27293 13525573 ~ 13531588 (-)
cttnbp2nlb LOC107717506,LOC107669604,LOC107562782,LOC107679769,LOC107711913,LOC107591755 coding downstream 189855 13351816 ~ 13369026 (-)
LOC122350377 LOC107562778,LOC107717538,LOC107669657,LOC107711943,LOC107679735,LOC107591842 coding downstream 259906 13286754 ~ 13298975 (-)
LOC122350644 LOC107556303,LOC107669603,LOC107751461,LOC107679797,LOC107711850,LOC107594521 coding upstream 975 13562956 ~ 13570832 (-)
kdm5bb LOC107751449,LOC107556320,LOC107711851 coding upstream 9098 13571079 ~ 13591176 (-)
tuba5 tuba8l,LOC108265838,LOC108425079,LOC107679810,LOC107711852,LOC107594520,LOC103031418 coding upstream 31720 13593701 ~ 13597847 (-)
LOC122351021 klhl12,LOC107679803,LOC107556315,LOC107711853,LOC107751446,LOC107594517 coding upstream 37269 13599250 ~ 13608277 (-)
adipor1b adipor1b,LOC107751445,LOC107679819,LOC107594512,LOC107711855 coding upstream 46873 13608854 ~ 13615338 (-)
G63751 NA non-coding downstream 208610 13347624 ~ 13350271 (-)
G63745 NA non-coding downstream 226494 13332164 ~ 13332387 (-)
G63735 NA non-coding downstream 284013 13261692 ~ 13274868 (-)
G63711 NA non-coding downstream 427664 13128190 ~ 13131217 (-)
G63631 LOC107591782,LOC107669630,LOC107711933,LOC107679511 non-coding downstream 758138 12797379 ~ 12800743 (-)
LOC122350567 NA non-coding upstream 58011 13619992 ~ 13682456 (-)
G63866 NA non-coding upstream 126197 13688178 ~ 13693222 (-)
G63867 NA non-coding upstream 137676 13699657 ~ 13700068 (-)
G63868 NA non-coding upstream 149174 13711155 ~ 13712401 (-)
G63873 NA non-coding upstream 161750 13723731 ~ 13724000 (-)
tafa3b si:ch211-254n4.3,fam19a3,LOC107711931,LOC107591764,LOC107562776,LOC107669582,LOC102289964,LOC104918365,LOC106582736,LOC105921069,LOC106517667,LOC108231490,LOC106937909 other downstream 312751 13185867 ~ 13246130 (-)
zmynd12 zymnd12,LOC107591768,LOC107711949,LOC107679700 other downstream 475509 12985654 ~ 13083372 (-)
foxp3a foxp3a,si:ch211-167b20.8,LOC107669635,LOC107731227,LOC107550508,LOC107711972,LOC107679368,LOC107591799,LOC107591800 other downstream 1054728 12489197 ~ 12504153 (-)
kcnq2a LOC107679259,LOC107668096,LOC107731192,LOC107550457,LOC108442249,LOC108265949,LOC107711924 other downstream 1195777 12342160 ~ 12363104 (-)
G63385 NA other downstream 1294348 12263694 ~ 12264533 (-)
mc3r mc3r,LOC107751459,LOC107669608,LOC107711834,LOC107680356 other upstream 154647 13716628 ~ 13720514 (-)
G63933 LOC107556304,LOC107751435,LOC107594508 other upstream 247447 13809428 ~ 13863250 (-)
LOC122350784 zgc:162939,LOC107602843,LOC107674500,LOC107724903 other upstream 823619 14385600 ~ 14455243 (-)
slc20a1a slc20a1a,LOC107724894,LOC107711884,LOC107686402,LOC107667554,LOC107602858,LOC108440301 other upstream 1161731 14723712 ~ 14731391 (-)
G64228 NA other upstream 1217550 14779531 ~ 14781710 (-)

Expression


Co-expression Network