rgs7bpa (rgs7bpa,LOC107565984,LOC107686392,LOC107599992,LOC107711899,LOC107667524,LOC107724873)


Basic Information

Item Value
gene id rgs7bpa
gene name rgs7bpa,LOC107565984,LOC107686392,LOC107599992,LOC107711899,LOC107667524,LOC107724873
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 14985714 ~ 14992465 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247295.1
GCTGTGAACACACTGGAGTTGGTGAATCTGTTGCATTAGTATTCTCATCCTATGAGAGTGCAGTGTGTTCAACCACGTCATGCCTCAAGCAACTGCACCTATCAAGGTTAGAATAGCGCTCTTAGATCACCTTCTGCTACCTACTCTCAATAAACGCCGCACGGAGTTGATCGTTTCAACTCGCGCCGCATATTAGTCTATTTCGAGTTGCGGCTACCGTCGCGGGGAGGCGTTTCGTTTAAAAGCGGCTGTTGTTTCTTCGTTGAAGGACCGTACGGGGCATCGAGACATGTTCGCATCTGGTTCTTTGTTATCGCGTTTCTCTCTGCCGAAGAAGACGAAGCCCTGCAAGGACACTTCGGCTCTTTGCCGGAGCGAATGAAGGTGACTCGGCTTCTGCGTCGCGGCAATGCGGAGAGAATCCGGGAGCGAGACACGGGCAGATCGATCCACTGAGTAAGAAATTTACCAAACGAGTGGGGCTGCGTATCGATCGATCGGCATTTTACATCAGGGCAGTTTCTTCACTTGATGTGTATGCATGAGTTCTGCACCGAATGGGCGCAAAAACCGCCCCAGAGCTGCCGGGACCATTTTCCAGATCGGCGGTAAGCCCCCGTCCAGAGAGCCGGAGCGCCGGGAGAGCAGCGAGGCTCTGCGTGCCGTAGCGGACTGCAGAATGGTTGTCCAGGAGTTCAATACACTTGTGGCCCTCTATAGGGAGTTGGTTATCTCTATTGGAGAGATTTCCGCCGATTGTCCTTCCCTTCGTGCGGAAATGCACAAGACACGCACAAAAGGCTGCGAGATGGCGCGTACTGCACATCAAAACCTTTCTGCAATATCAGgCCCAGAAGATGGAGAAATACATCCGGAGATCTGCCGCCTCTTCATCCAGCTGCAGTGCTGTCTGGAAATGTACCTGACGGAGATGCTGAAGTCTGTGTGTCTGCTGGGATCCCTGCAGCTCCACAGGAAAGgaaaacatttttcaggagCTACAAGGGTAGAAAGTAAGAAAGAGGACAGCTCTGACATCCCGATCCTGGAAGACACGTCTTCTACTCCACCGGACTGTCCGCAGACATACTTCCTGGTGGCCACAGACATTGAGAACATAGAGAGGGACatgacagaaatgaaaaatctgcTAAGCAAACTCAGGGAGACCATGCCTTTACCACTGAAGAACCAAGATGACAGCAGCTTGTTGAATCTGACGCCATACCCATTGGTCCGGCAGAGAAAGCGGCGTTTCTTTGGCCTCTGTTGTCTGGTGTCCAGCTAAGCGCTCTCTCTCCCAGAGTCCAGTCACAAATGACCGCATTTCCTCACAATGTGTGACACTCACCAATCAACAGTACTACTGCCATTTCCCAAACCAGTGCTTTCTTTTGGTGAGTTCTGTCCAATTTCCTACCGCTATGAGAATAAGTAGTAATATCTGTGTAACATCAGTAGTCATACAAACgctatttaaaaatttgatcGGTACGACagattttcgttttttttttttataactgaaCGTTCGTTCTACATTATGCTTAGTAAAGAAAATGGTTTGTAGTACGAATACTGCTATGTCTGTCCACACGATTCATATGCTGTGCTTTTCGTCAAGACAGGTGTTGTAATGAGGCGTTGGAGATTGCTCATTAGAACAGAGGTTATGCTAAACAtttttctgaggaaaaaaaaaaaaaaaaaaagtaaaaaaatactgcaacatgaGTGAATGTGCTATCTGTTGGTTCTTTTGGTCAGATTTTTTGCTGTTACCATGTTTTTACTACAGTTTTATTTAGTCTTCCATAAACCGAAATCCtgtaacttttgttttgtttcagccTTTAGGAGTATATAATACCTGAAGAAGCCTTtgtaaataaagaatattatcTATAAATGGAAATTTTAGAGATGTACATATACAATGTAAACCTAGCGCtctgaattatttttcaaaactgtgATTCTTTTAAAGAGATTGTCAGTAAAGGGTGGCATGTCTATCCATCTGGTGTGATATAAGTCCAGATTGGAGGGGCTCAGCATGGGTCTTGCTTATTAATAACAGTTCTAAATGTGTCAGGCATGGTGAAGATACTGTAGTGTTTATGAAAAGGCGCAGTGTCGTTTTACATTggtaataaacctttttttaatgatttaa
>XM_043247296.1
TGGAGAGATTTCCGCCGATTGTCCTTCCCTTCGTGCGGAAATGCACAAGACACGCACAAAAGGCTGCGAGATGGCGCGTACTGCACATCAAAACCTTTCTGCAATATCAGggtaaaaacacacatgcatacagCCCAGAAGATGGAGAAATACATCCGGAGATCTGCCGCCTCTTCATCCAGCTGCAGTGCTGTCTGGAAATGTACCTGACGGAGATGCTGAAGTCTGTGTGTCTGCTGGGATCCCTGCAGCTCCACAGGAAAGgaaaacatttttcaggagCTACAAGGGTAGAAAGTAAGAAAGAGGACAGCTCTGACATCCCGATCCTGGAAGACACGTCTTCTACTCCACCGGACTGTCCGCAGACATACTTCCTGGTGGCCACAGACATTGAGAACATAGAGAGGGACatgacagaaatgaaaaatctgcTAAGCAAACTCAGGGAGACCATGCCTTTACCACTGAAGAACCAAGATGACAGCAGCTTGTTGAATCTGACGCCATACCCATTGGTCCGGCAGAGAAAGCGGCGTTTCTTTGGCCTCTGTTGTCTGGTGTCCAGCTAAGCGCTCTCTCTCCCAGAGTCCAGTCACAAATGACCGCATTTCCTCACAATGTGTGACACTCACCAATCAACAGTACTACTGCCATTTCCCAAACCAGTGCTTTCTTTTGGTGAGTTCTGTCCAATTTCCTACCGCTATGAGAATAAGTAGTAATATCTGTGTAACATCAGTAGTCATACAAACgctatttaaaaatttgatcGGTACGACagattttcgttttttttttttataactgaaCGTTCGTTCTACATTATGCTTAGTAAAGAAAATGGTTTGTAGTACGAATACTGCTATGTCTGTCCACACGATTCATATGCTGTGCTTTTCGTCAAGACAGGTGTTGTAATGAGGCGTTGGAGATTGCTCATTAGAACAGAGGTTATGCTAAACAtttttctgaggaaaaaaaaaaaaaaaaaaagtaaaaaaatactgcaacatgaGTGAATGTGCTATCTGTTGGTTCTTTTGGTCAGATTTTTTGCTGTTACCATGTTTTTACTACAGTTTTATTTAGTCTTCCATAAACCGAAATCCtgtaacttttgttttgtttcagccTTTAGGAGTATATAATACCTGAAGAAGCCTTtgtaaataaagaatattatcTATAAATGGAAATTTTAGAGATGTACATATACAATGTAAACCTAGCGCtctgaattatttttcaaaactgtgATTCTTTTAAAGAGATTGTCAGTAAAGGGTGGCATGTCTATCCATCTGGTGTGATATAAGTCCAGATTGGAGGGGCTCAGCATGGGTCTTGCTTATTAATAACAGTTCTAAATGTGTCAGGCATGGTGAAGATACTGTAGTGTTTATGAAAAGGCGCAGTGTCGTTTTACATTggtaataaacctttttttaatgatttaa

Function

symbol description
rgs7bpa Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to act upstream of or within negative regulation of signal transduction. Predicted to be located in cytoplasm and plasma membrane. Predicted to be active in neuron projection; nucleus; and postsynapse. Orthologous to human RGS7BP (regulator of G protein signaling 7 binding protein).

NR:

description
regulator of G-protein signaling 7-binding protein

GO:

id name namespace
GO:0009968 negative regulation of signal transduction biological_process
GO:0005886 plasma membrane cellular_component
GO:0005634 nucleus cellular_component
GO:0005737 cytoplasm cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247295.1 True 2176 mRNA 0.45 6 14985714 14992465
XM_043247296.1 False 1460 mRNA 0.41 5 14985714 14990221

Neighbor

gene id symbol gene type direction distance location
c8h5orf51 si:dkey-46a10.3,LOC107667559,LOC107686395,LOC107711895,LOC107602868,LOC106580621,LOC106585203 coding downstream 66544 14914656 ~ 14919170 (-)
fbxo4 LOC107667563,LOC107686410,LOC107724879,LOC107599997,LOC107602866,LOC107711844 coding downstream 71699 14909918 ~ 14914015 (-)
ghra LOC107602865,LOC107724907,LOC107711892 coding downstream 82211 14873186 ~ 14903503 (-)
znf131 znf131,LOC107667557,LOC107602864,LOC107724914,LOC107686396,LOC107711893 coding downstream 121933 14859637 ~ 14863781 (-)
nim1ka nim1k,LOC107602863,LOC107667564,LOC107686411,LOC107599996,LOC108412738 coding downstream 126750 14848506 ~ 14858964 (-)
rnf180a rnf180,LOC107667512,LOC107599991,LOC107711845,LOC106584965 coding upstream 919 14993384 ~ 14998606 (-)
ipo11 ipo11 coding upstream 33625 15026090 ~ 15146427 (-)
lipg LOC107738997,LOC107565987,LOC107711901,LOC107686385,LOC107599989,LOC107667539 coding upstream 167689 15160154 ~ 15165061 (-)
si:dkey-164f24.2 LOC107667555,LOC107723247,LOC107570302,LOC107711905 coding upstream 187803 15180268 ~ 15188644 (-)
LOC122350063 rfesd,LOC107711828,LOC559859,LOC107580528 coding upstream 198121 15190586 ~ 15192936 (-)
G64229 sepp1a,LOC107576224 non-coding downstream 116027 14865798 ~ 14869687 (-)
G64238 NA non-coding downstream 144948 14840523 ~ 14840766 (-)
G64236 NA non-coding downstream 147098 14838381 ~ 14838616 (-)
G64227 NA non-coding downstream 206350 14778898 ~ 14779364 (-)
G64223 NA non-coding downstream 216443 14768973 ~ 14769271 (-)
G64278 NA non-coding upstream 7266 14999731 ~ 15000001 (-)
G64337 NA non-coding upstream 176213 15168678 ~ 15170180 (-)
G64338 NA non-coding upstream 179479 15171944 ~ 15172605 (-)
G64336 NA non-coding upstream 183571 15176036 ~ 15178095 (-)
G64348 NA non-coding upstream 228367 15220832 ~ 15222540 (-)
G64228 NA other downstream 204004 14779531 ~ 14781710 (-)
slc20a1a slc20a1a,LOC107724894,LOC107711884,LOC107686402,LOC107667554,LOC107602858,LOC108440301 other downstream 254323 14723712 ~ 14731391 (-)
LOC122350784 zgc:162939,LOC107602843,LOC107674500,LOC107724903 other downstream 530471 14385600 ~ 14455243 (-)
G63933 LOC107556304,LOC107751435,LOC107594508 other downstream 1122464 13809428 ~ 13863250 (-)
mc3r mc3r,LOC107751459,LOC107669608,LOC107711834,LOC107680356 other downstream 1265200 13716628 ~ 13720514 (-)
G64353 hmcn2,LOC107723245,LOC107659581,LOC107570300 other upstream 291396 15283861 ~ 15284130 (-)
mvb12bb mvb12b,LOC107550570,LOC107753158,LOC107723228 other upstream 656761 15649226 ~ 15700896 (-)
LOC122350093 NA other upstream 1415369 16407834 ~ 16409696 (-)
LOC122350945 drd2b,LOC107745132,LOC107705176,LOC107691748,LOC107664308,LOC107600777,LOC107556418,LOC108428674 other upstream 2054002 17046467 ~ 17096795 (-)
LOC122350953 NA other upstream 2327911 17320376 ~ 17401228 (-)

Expression


Co-expression Network