c8h5orf51 (si:dkey-46a10.3,LOC107667559,LOC107686395,LOC107711895,LOC107602868,LOC106580621,LOC106585203)


Basic Information

Item Value
gene id c8h5orf51
gene name si:dkey-46a10.3,LOC107667559,LOC107686395,LOC107711895,LOC107602868,LOC106580621,LOC106585203
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 14914656 ~ 14919170 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247985.1
CTCTTGCTTTGATATATGTGCCAAGCGAGGAGTTTATGAATGAAACGAAAGAACAAAACACTCCTGTAATCCTCTGCACGTGAGTAATCGCGCGCCCGTCACGTGACTGTCGTTTGCAGTCATGGCCGACGACTACAGACGAAGCGTCGAGCTGGAGAGGAGGATTTTTGAGTTAGATAACAAGTGTGCCACTCTTCGGACGGAGAAACCAGATGATGACTACTTACAGAATGCATCTTCCATACTAGACAAGTTGAAAAGTTATTATAGACATGGAGGAGAGAGCAGCAGCCTCCCTAAACTGCTGCAGGATTATACACAGGTTGTCCTGGATATTACATTCTATGAGGAAAACAGGCTTGTAGATCAAGAGTTTCCCGAGGACACTTCCCCTTTCAAAATCCAGCAGTTACTACAGGACTTGACAGAGCCAGAGGTGTTAGCCGGGCGACTGGTACCTGCACAAGAGGTGCAGTCTGTGCTGGGGCTGGAGCTGCTGGAGTGCCTATATTGGAGGCGTGGGGCATTATTATACATGTACTGCCACACACTACACCAACGCAAGCAGTGGATCAAGAAGAACAAAGCCACATTCCTTAAGTGTCTTCAAGAAGGTGTGCGTTACCTAATGAGAATGTTGCAAGTGAGGAACTCGGTCAAGCTGAACGATGGCGTGGTTTTTCATGACTCTGCAACCGCCAATTTTCTGGCAGAAGGTATCTTTTCTGATACTCACTTGCTTACAATGATGTACATTGGTGAGATGTGTTTCTGGGCGGTGAAATATGAGGACTGCAGCATGGACACCACAGAGCGCAAAGAGGACAGGCTTCATTTCCGAGATATTGGCACACAAATCCTCCATAAGTACGTGCTGGCATGCGAGGGGCCACTTCAGGGTCAGGGCTGGAACACAGAGAATGCCAAGGAGATCCttagtattttacagtaaaccTGGAGAGAGCTTTTAGGAGAGGAGGTTCACAAAATGTCATTGTTCTGAagctagcaaaaaaaaaaaagaagtaaaaacgcaaacaaagaaaaagattaaaaagaaaatactgaaaacaaaaaaaaaaaggcacttaTCTTCCGGTCCAGATTTGTTTTCTGGATGTGTGTTTTCGCTGAGAATGTGGAATAATACttctaatgtaaaatataaacaaataactatttgtttaagaaaaaaaaagttccagcCGAGAAACatcacaactttttatttattttaatttttatttatttatttttaattaattacatttatatatgtcatttatatatgttaaaagAAATGGTACAAAGGAGGGGTAAAATGCAGGTATATGTTGCATATTTAAGTATTTGTGACCATTTTTAAGTATGgaccttttctttttaataacatCTTTGTATATGACACCTCTTCTGCTCACTTATTAAAAGTTGCATCTTTATTCCTTTCATTGACCAGATGTAATGTTCAGAGATGGGAATTTGGATATTTTGAtagtatacttttaaaaagctaaacttTTTGGtcatattctttttaaaatgaagttcatttttttgttttttatgtcttcattgaaataaattttgggttaagaaatgtt

Function

symbol description
si:dkey-46a10.3 Orthologous to human C5orf51 (chromosome 5 open reading frame 51).

NR:

description
PREDICTED: UPF0600 protein C5orf51 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247985.1 True 1604 mRNA 0.39 6 14914656 14919170

Neighbor

gene id symbol gene type direction distance location
fbxo4 LOC107667563,LOC107686410,LOC107724879,LOC107599997,LOC107602866,LOC107711844 coding downstream 641 14909918 ~ 14914015 (-)
ghra LOC107602865,LOC107724907,LOC107711892 coding downstream 11153 14873186 ~ 14903503 (-)
znf131 znf131,LOC107667557,LOC107602864,LOC107724914,LOC107686396,LOC107711893 coding downstream 50875 14859637 ~ 14863781 (-)
nim1ka nim1k,LOC107602863,LOC107667564,LOC107686411,LOC107599996,LOC108412738 coding downstream 55692 14848506 ~ 14858964 (-)
creb3l3l creb3l3l,LOC107711890,LOC107686399,LOC107724916,LOC107667558,LOC107599998 coding downstream 66692 14842494 ~ 14847964 (-)
rgs7bpa rgs7bpa,LOC107565984,LOC107686392,LOC107599992,LOC107711899,LOC107667524,LOC107724873 coding upstream 66544 14985714 ~ 14992465 (-)
rnf180a rnf180,LOC107667512,LOC107599991,LOC107711845,LOC106584965 coding upstream 74214 14993384 ~ 14998606 (-)
ipo11 ipo11 coding upstream 106920 15026090 ~ 15146427 (-)
lipg LOC107738997,LOC107565987,LOC107711901,LOC107686385,LOC107599989,LOC107667539 coding upstream 240984 15160154 ~ 15165061 (-)
si:dkey-164f24.2 LOC107667555,LOC107723247,LOC107570302,LOC107711905 coding upstream 261098 15180268 ~ 15188644 (-)
G64229 sepp1a,LOC107576224 non-coding downstream 44969 14865798 ~ 14869687 (-)
G64238 NA non-coding downstream 73890 14840523 ~ 14840766 (-)
G64236 NA non-coding downstream 76040 14838381 ~ 14838616 (-)
G64227 NA non-coding downstream 135292 14778898 ~ 14779364 (-)
G64223 NA non-coding downstream 145385 14768973 ~ 14769271 (-)
G64278 NA non-coding upstream 80561 14999731 ~ 15000001 (-)
G64337 NA non-coding upstream 249508 15168678 ~ 15170180 (-)
G64338 NA non-coding upstream 252774 15171944 ~ 15172605 (-)
G64336 NA non-coding upstream 256866 15176036 ~ 15178095 (-)
G64348 NA non-coding upstream 301662 15220832 ~ 15222540 (-)
G64228 NA other downstream 132946 14779531 ~ 14781710 (-)
slc20a1a slc20a1a,LOC107724894,LOC107711884,LOC107686402,LOC107667554,LOC107602858,LOC108440301 other downstream 183265 14723712 ~ 14731391 (-)
LOC122350784 zgc:162939,LOC107602843,LOC107674500,LOC107724903 other downstream 459413 14385600 ~ 14455243 (-)
G63933 LOC107556304,LOC107751435,LOC107594508 other downstream 1051406 13809428 ~ 13863250 (-)
mc3r mc3r,LOC107751459,LOC107669608,LOC107711834,LOC107680356 other downstream 1194142 13716628 ~ 13720514 (-)
G64353 hmcn2,LOC107723245,LOC107659581,LOC107570300 other upstream 364691 15283861 ~ 15284130 (-)
mvb12bb mvb12b,LOC107550570,LOC107753158,LOC107723228 other upstream 730056 15649226 ~ 15700896 (-)
LOC122350093 NA other upstream 1488664 16407834 ~ 16409696 (-)
LOC122350945 drd2b,LOC107745132,LOC107705176,LOC107691748,LOC107664308,LOC107600777,LOC107556418,LOC108428674 other upstream 2127297 17046467 ~ 17096795 (-)
LOC122350953 NA other upstream 2401206 17320376 ~ 17401228 (-)

Expression


Co-expression Network