ercc6l2 (LOC107669670,LOC107724913,LOC107602840,LOC107689281)


Basic Information

Item Value
gene id ercc6l2
gene name LOC107669670,LOC107724913,LOC107602840,LOC107689281
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 14273536 ~ 14285846 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247806.1
CTCCCTGTGTTGCGACGCTGTGTGCAGCATGATGCTAGCTAGATgagaatgaaattaaacacGTTCACACGCAGAGGGGAAACTGCCTGTTTATCACAGTTAATCAGCAATCTTCACAGTTAGCTCTGCAATAAATATATGCCGTCCCAGAAACTTCAGCGAGACTATAATGAATTCATAATGGTTGTATGAAAGCCGttgtatgaaaaaaacaacaaaaaaaaccatgcTGACGGTTAAGTGTAGTCTACTCaacaaaatgacttttgtgcTGAAAAGTCTGTCACAGCTGAACAAGACTTTGCCCAGCTAGCACCCGTGTTGAAGTGGACGCGTTCTCTGTGGAGATGGAGGAGGAAGACTTATTTACAAAGCGCCAGGATGCTAGAACATCACTTCCTCAGTTTGAGGATGAGCGTCCTCTCTTTCACAGTAATCGGACGCCGCCGGGTCCTCCGGAGCCGTTTCTGCTGTCGGGAAGTGATGTGACAGTTCCATACACCATCAATCGATATTTACGTGACTACCAGCGAGAAGGCATAAAATTTATCTATCATAACTACGCCAAATCTAGAGGATGCATTTTGGGTGACGACATGGGTCTTGGAAAGACTGTCCAGGTCATAGGTTTCCTGGCTGCAGTTCTGCGAAAAACGGGTACATGGAAAGACGTCGAAAACAATAAGCCACAGTTTTTGTTGTCACAGAAGCCAACGGAAGAGGTTCAGAAGGTTTTTCTCATTGTGGCTCCGCTCTCTGTTCTCTACAACTGGAAAGATGAGTTAGATACGTGGGGTCATTTCAGAGTGGTGGTCGTGCATGGTGTGAGGAAGGACGAAGAATTGGCTCGTGTGCAGAGAGGGAGGTGTGAGGTTGCTCTTACAACTTATGAGACCCTTAGACTCTGTTTGGACCAGTTTAACAGTATTGACTGGGCTGCCGTTTTCGTTGACGAAGCTCACAAAATAAAGAACCCAAAGTCTCAGATCACTCAAGCCATGAAGAACATGGGATGTAAAGTGAGGGTTGGACTGACAGGAACAATCCTTCAGAACAACCTGGAGGAATTGTGGTGTGTTATGGACTGGGCCATTCCTGGATGCCTGGGTTCTCTGGTGGGTTTTAAAAACAGGTTTTCGGACCCCATTGAGCATGGACAAAAGCACACCGTGACAAAAAGAGCTCTAGCAGAAGGCCGTCAAGCAGTTCAGGACCTTGCCAAAAAACTCTCACACTGGTTCCTCAGGAGAACAAAGGCCCTCATCAGTGACCAGCTACCTAAGAAAGATGATCGAGTGGTGTATTGCTCTCTCACAGACTTCCAGCGGAAGGTGTATCGCGCCGTGCTGGACACAGAGGATGTGACTCTGCTGTTGCAGAGCTCAGGAAAGTGTCACTGTGGCAGTGGCCGTCCACGGAAGACGTGCTGCTACAAACTTAATGCTAACGGTGTGCCGGTTAGATACCTGTACTTTAGTTATCTGACTATCCTGAGAAAGGTGGCCAATCATGTTGCGCTGCTTCAGTCCAAAGAAGGAAGCAGCAAAAAACAGGAGAAATATGTGACAGCCATTTGTGAGCAAGTTTTTAGGAAGTTTCCAGATTTCATTGGGAGGTGCAAACAAGCAGCCTTTGAAGCGATGTCTGACCCCATGTACAGTGGAAAAATGAAGGTTCTGCAAAAGCTGCTCAACCACTTTATCGCAAAGAAAGACAAAGTTCTACTTTTCTCCCTCTCCACCAAGcTGTTAGATGTTCTAGAAAGCTATTGTATGGCCGAGGGTCTGGAGTACCACAGACTGGATGGAAACACCAAGTCTAAGGACCGAGTTAGGATAGTGAAAGAGTTCAACAGCTCTCGGGACGTCAACCTGTGTCTGGTGTCTACCTTGGCGGGTGGGCTTGGTCTCAACTTTGTTGGAGCGAATGTTGTCGTGTTGTTTGATCCAACATGGAATCCTGCCAATGATCTTCAGGCTATTGACAGGGTTTATCGTATTGGCCAGTGCAGGGATGTGAGCGTCTTTAGACTTATTTCTTTAGGAACAGTAGAGGAGATCATATACCTGCGCCAGATTTACAAACAGCAACTTCAGTCATCAGTCCTAGGCCAGGAGAATGCTAGACGCTACTTTGAAGCTGTTCAGGGAATCGACGGCCAGGCAGGAGAGCTGTTTGGCATTCGAAACCTTTTTCGTCTGCAGACTGATGGCACCTGTCTTACCCACCGCATCCTGGAGAGGGAGGGCCGAGTGGAGGTGGGGATCATGACGGCCAGAACTCAAGCTCTGGACGAGAGTGTGCAGGAGCCAGATCTTCAGTCAGCAGATGCTGCTACCGAGAGAGCAGGTGGATCAACTGGGGGTGGGTTTAAACCTGCTGGTGTGTTGGACTTCAGCAGTGCGAGTGAGGATGAAGATCCCTGCTGTTCCAGGTCCAGGCCCTCAGAAGCACACACAGGAGAAGAGGGGGGAGCTGGCGCTAACTGCATTGGCAATATGGGTCTTTATGGTCTGCTCCAAAGACAAATGGCTCAGAGAGCACGGCAGGAGACGGACAGTGACGAGGACTCTAGTAGCCCGGATGAGGACAACTGCAAAAAACCCACCACGATTAAGGAACAAACATCTAAGACACGGGATCTGTTCACTGAATCCAAGGAAAGGGTGGATGGAGTCATTGATGgtaaacaacagaagaaatcAGCAGACCTTGAGCTTAAAGACCGCAACGACAGAATGACTGCTAGCAAGAAGCGTTTTCACAAAAGGGTGACGTTTGCAGAAAAAAGATGTGAAGATGAAAGTTTTACCTCATCAGAAGATGAAGTTCCCCAGGATGGGATTAGATATATGAAGGGGCAGGACAATAAATCTGGGAGGGAGAGTGCCACTCAAAAATCTTTGGGCATAAAGAGCCGAAACTCACGCCAAACATCAGGATCCACTGGAACACTGGACACATTATTAGGGGGTCTTCAGGACGTGAGCTACACCCACTCTAACCAGAAGGTAGTGGGCTCCAGCAGAGCAGAAGACTGCCTGAGTCGTGCTGCCGTACGAGATGTGTTTGAACTGAACAAGCACTCGCAGCTTCTTGCAAACCAGCTTCCAGACTCCTCAGagACCCAGTCATCCGATCCCATACTCACAGATCACGTTGATGGAGGTCAGGCACTGCAGGAACATGGCAGACCCCGCAATGAACATCCAGTCAAACACACCCTCAAAAACTCTTACTGCCAGAACAATGTCACTGTCTTAGTAGGCGAGACACCCAGTAGCATGTGCAGACAGCAGATGGAGGACATGGCTCAGTTCTTTGGATTCAACTCTGTGTGCGAGTTTGCGGAAGAGATTCTGAAGAACGATTCAGAGCAGAGACTGAGCCGATCACGGAGCTTCTACAGCCAGAAGAGCCCTGAACTTAAAGATATCATCGGTAAGACCTTTCCTAAACCCATCGAAACAGAGCCACCACCATCTCCAGCTAAACAAAGACCTACCTCAAAAAGAGCCCACCCAAACTCCCATCTTAAACCTCAAGTTGGGGTACCAACCCCTGAGGTTGAGGATGgaagaaaaacatcaaagaaaaagaaagtgggTGAAACGGGAACCTCTGAGGTTCACCTTCACTGCAGCACAGACCTCACAAacaataaagttaaaatgtccTCCACAGACAAAAGCTCGACTTCTGGACATGTTCCTCAAAGGAGCTGTGCGCcagcagaagaaaataaaaccaaCATTAATACTTCCTCACAACCATTCAAGGACAAGGAATACTCTACACGATCATCTTGTGTCTCCACAGATGATTGTGTTGCATCAAGCTCAACCCAGACCAACAGCTCCTCACAAATCACTGACCTTATAGGGGACACATCCATCCTGGACGACTTGTTCAAGCCAAAGAGGAAAACTGTGGACCAAGCTAGAGATGTGAAAGCATCCACGTGCACAGAAAGAGCAAAAAATAGAGGAAAGGACTTTTGGGACATTTTGAATGAGGGAAATGAGGAGAGCATTAACAAACTCACAGATCTGACAGAGGTGGAGAAGATCTGCAACAGTGTCAGTGTCTCTGCAAAGTCTAGGAATAATCAGGAAACCGAAAGCTCGcagctttggaaaaaaaatgagaaatttcTCTGGAAGcgatagttttcttttttatttttaatgattatttataatgttatgtttttattgcaagtgcatatactttttatgtaagtccgtttttaattacttttttttgtgtatgttttttttttcctcaggttTTAGTAGGTTTCACAGGACAATTGATTGTCagttaatgcttttattattgttttagaaaTCTTATTAGAGTTCTCAATGAAGGCATAAGGATTTAAatttgcaatgtgtttttttttttataaaagaagaatttagccattgaaaaaaaacaatacaaaaaaagaatattataatAAAGGAACATGGATAAAGATGC

Function

NR:

description
DNA excision repair protein ERCC-6-like 2

GO: NA

KEGG:

id description
K20098 ERCC6L2; DNA excision repair protein ERCC-6-like 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247806.1 True 4488 mRNA 0.46 19 14273536 14285846

Neighbor

gene id symbol gene type direction distance location
slc20a2 slc20a2,LOC107724891,LOC107669617,LOC107602837,LOC107594502,LOC107711867 coding downstream 14492 14225356 ~ 14259044 (-)
LOC122349900 LOC107724883,LOC107580262,LOC107669607 coding downstream 79035 14193833 ~ 14194501 (-)
mpeg1.1 mpeg1.1,LOC107724877,LOC107669601,LOC107602834,LOC107679909,LOC107724864,LOC107751428,LOC107602817 coding downstream 83292 14187429 ~ 14190244 (-)
LOC122350320 prf1.5,LOC107751453,LOC107574770,LOC107594505,LOC107711865,LOC107679935 coding downstream 87395 14181532 ~ 14186141 (-)
LOC122350319 LOC107574771,LOC107751454,LOC107669655 coding downstream 97713 14173054 ~ 14175823 (-)
dock8 dock8,LOC107724900,LOC107711870 coding upstream 169581 14455427 ~ 14493418 (-)
gucd1 gucd1,LOC107724905,LOC107711875,LOC107689268 coding upstream 334810 14620656 ~ 14625056 (-)
p2rx7 p2rx7,LOC107724924,LOC107667522,LOC107602831,LOC107711876,LOC107600008 coding upstream 343976 14629822 ~ 14635444 (-)
gstt1a gstt1a,LOC107724878,LOC107667523,LOC107602832,LOC107689282,LOC107711839,LOC107600045 coding upstream 352717 14638563 ~ 14640033 (-)
smarcb1a smarcb1a,smarcb1,LOC107602851,LOC107600005,LOC107667904 coding upstream 378973 14664819 ~ 14670406 (-)
G63981 NA non-coding downstream 3773 14268604 ~ 14269763 (-)
G63980 NA non-coding downstream 7493 14265726 ~ 14266043 (-)
G63979 NA non-coding downstream 7901 14265172 ~ 14265635 (-)
G63976 NA non-coding downstream 69615 14203642 ~ 14203921 (-)
G63975 NA non-coding downstream 70266 14203046 ~ 14203270 (-)
G63997 NA non-coding upstream 12445 14298291 ~ 14298590 (-)
G64223 NA non-coding upstream 483127 14768973 ~ 14769271 (-)
G64227 NA non-coding upstream 493052 14778898 ~ 14779364 (-)
G64236 NA non-coding upstream 552535 14838381 ~ 14838616 (-)
G64238 NA non-coding upstream 554677 14840523 ~ 14840766 (-)
G63933 LOC107556304,LOC107751435,LOC107594508 other downstream 410286 13809428 ~ 13863250 (-)
mc3r mc3r,LOC107751459,LOC107669608,LOC107711834,LOC107680356 other downstream 553022 13716628 ~ 13720514 (-)
tafa3b si:ch211-254n4.3,fam19a3,LOC107711931,LOC107591764,LOC107562776,LOC107669582,LOC102289964,LOC104918365,LOC106582736,LOC105921069,LOC106517667,LOC108231490,LOC106937909 other downstream 1027406 13185867 ~ 13246130 (-)
zmynd12 zymnd12,LOC107591768,LOC107711949,LOC107679700 other downstream 1190164 12985654 ~ 13083372 (-)
foxp3a foxp3a,si:ch211-167b20.8,LOC107669635,LOC107731227,LOC107550508,LOC107711972,LOC107679368,LOC107591799,LOC107591800 other downstream 1769383 12489197 ~ 12504153 (-)
LOC122350784 zgc:162939,LOC107602843,LOC107674500,LOC107724903 other upstream 99754 14385600 ~ 14455243 (-)
slc20a1a slc20a1a,LOC107724894,LOC107711884,LOC107686402,LOC107667554,LOC107602858,LOC108440301 other upstream 437866 14723712 ~ 14731391 (-)
G64228 NA other upstream 493685 14779531 ~ 14781710 (-)
G64353 hmcn2,LOC107723245,LOC107659581,LOC107570300 other upstream 998015 15283861 ~ 15284130 (-)
mvb12bb mvb12b,LOC107550570,LOC107753158,LOC107723228 other upstream 1363380 15649226 ~ 15700896 (-)

Expression


Co-expression Network