LOC122349900 (LOC107724883,LOC107580262,LOC107669607)


Basic Information

Item Value
gene id LOC122349900
gene name LOC107724883,LOC107580262,LOC107669607
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 14193833 ~ 14194501 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246031.1
GCGCCCGTCCTCAACAAGCGCAGTCTCGTCAGACATCTCCTCCCAGCTGACGTCCTGGTTCAAATAAGCTGTCAGTCATGTCCACAGCCCCATCGTCTGCTACTAAAACGCCGAGACGAAGGTCCAAGGCCAAGAAGTCAGGAGCCAGTGCGTCTGATCTGATCCTTAAGGTCTTGTCATCTTCTAAGGAGCGCGGTGGAGTCTCTCTGGTCGCTCTGAAGAAAGCTCTGTCCGCCGGTGGTTATGATGTCGTGAGAAACAACTCGCGCGTCAAACTGGCGGTAAAGCGACTGGTGGCCAGCGGCCGTCTAATGCAGACCAAAGGCACCGGAGCCTCTGGATCATTCAAGACCGGCGCGAAAGCCGCTACAAAGCCGAAGAAGCCAAAGGCGAAGAGGGCAAAGAGAAAGACGGCTAAGAAACCCGCCGGGGCAAGGAAGTCGCCTAagaaaagaaggagaaatcTGAAAAGTGCTGAAAAAGCCAGCGAGACGGCCGCGGTCAAGAAGACCCCGAAACCCAAGAGAGCCAAACGGAGAGCTTCCAGAACAAGCAAAGCGAAAACTGCCCAGAAATAATTGTTATAATGACTGCTCTTCATACCTCTTAAAGGATTCTTGCATCCTTTtactttgtaaaaaataaaataattattaattaacaaaaccA

Function

NR:

description
PREDICTED: histone H1.4-like

GO:

id name namespace
GO:0006334 nucleosome assembly biological_process
GO:0000786 nucleosome cellular_component
GO:0005634 nucleus cellular_component
GO:0003677 DNA binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246031.1 True 669 mRNA 0.51 1 14193833 14194501

Neighbor

gene id symbol gene type direction distance location
mpeg1.1 mpeg1.1,LOC107724877,LOC107669601,LOC107602834,LOC107679909,LOC107724864,LOC107751428,LOC107602817 coding downstream 3589 14187429 ~ 14190244 (-)
LOC122350320 prf1.5,LOC107751453,LOC107574770,LOC107594505,LOC107711865,LOC107679935 coding downstream 7692 14181532 ~ 14186141 (-)
LOC122350319 LOC107574771,LOC107751454,LOC107669655 coding downstream 18010 14173054 ~ 14175823 (-)
cebpb cebpb,LOC107556312,LOC107669676,LOC107751442,LOC107594515,LOC107679873,LOC107711812 coding downstream 552351 13639945 ~ 13641482 (-)
adipor1b adipor1b,LOC107751445,LOC107679819,LOC107594512,LOC107711855 coding downstream 578495 13608854 ~ 13615338 (-)
slc20a2 slc20a2,LOC107724891,LOC107669617,LOC107602837,LOC107594502,LOC107711867 coding upstream 30855 14225356 ~ 14259044 (-)
ercc6l2 LOC107669670,LOC107724913,LOC107602840,LOC107689281 coding upstream 79035 14273536 ~ 14285846 (-)
dock8 dock8,LOC107724900,LOC107711870 coding upstream 260926 14455427 ~ 14493418 (-)
gucd1 gucd1,LOC107724905,LOC107711875,LOC107689268 coding upstream 426155 14620656 ~ 14625056 (-)
p2rx7 p2rx7,LOC107724924,LOC107667522,LOC107602831,LOC107711876,LOC107600008 coding upstream 435321 14629822 ~ 14635444 (-)
G63955 grid2,LOC107568412,LOC107751431,LOC107594506,LOC107680191,LOC107711862 non-coding downstream 56410 14131391 ~ 14137423 (-)
G63956 grid2,LOC107669587,LOC107711862,LOC107751431,LOC107680191 non-coding downstream 65411 14128189 ~ 14128422 (-)
G63963 NA non-coding downstream 75831 14117730 ~ 14118002 (-)
G63962 grid2,LOC107669587,LOC107751431,LOC107711862,LOC107680191 non-coding downstream 93682 14099665 ~ 14100151 (-)
G63944 NA non-coding downstream 131093 14062497 ~ 14062740 (-)
G63975 NA non-coding upstream 8545 14203046 ~ 14203270 (-)
G63976 NA non-coding upstream 9141 14203642 ~ 14203921 (-)
G63979 NA non-coding upstream 70671 14265172 ~ 14265635 (-)
G63980 NA non-coding upstream 71225 14265726 ~ 14266043 (-)
G63981 NA non-coding upstream 74103 14268604 ~ 14269763 (-)
G63933 LOC107556304,LOC107751435,LOC107594508 other downstream 330583 13809428 ~ 13863250 (-)
mc3r mc3r,LOC107751459,LOC107669608,LOC107711834,LOC107680356 other downstream 473319 13716628 ~ 13720514 (-)
tafa3b si:ch211-254n4.3,fam19a3,LOC107711931,LOC107591764,LOC107562776,LOC107669582,LOC102289964,LOC104918365,LOC106582736,LOC105921069,LOC106517667,LOC108231490,LOC106937909 other downstream 947703 13185867 ~ 13246130 (-)
zmynd12 zymnd12,LOC107591768,LOC107711949,LOC107679700 other downstream 1110461 12985654 ~ 13083372 (-)
foxp3a foxp3a,si:ch211-167b20.8,LOC107669635,LOC107731227,LOC107550508,LOC107711972,LOC107679368,LOC107591799,LOC107591800 other downstream 1689680 12489197 ~ 12504153 (-)
LOC122350784 zgc:162939,LOC107602843,LOC107674500,LOC107724903 other upstream 191099 14385600 ~ 14455243 (-)
slc20a1a slc20a1a,LOC107724894,LOC107711884,LOC107686402,LOC107667554,LOC107602858,LOC108440301 other upstream 529211 14723712 ~ 14731391 (-)
G64228 NA other upstream 585030 14779531 ~ 14781710 (-)
G64353 hmcn2,LOC107723245,LOC107659581,LOC107570300 other upstream 1089360 15283861 ~ 15284130 (-)
mvb12bb mvb12b,LOC107550570,LOC107753158,LOC107723228 other upstream 1454725 15649226 ~ 15700896 (-)

Expression


Co-expression Network