CI01000010_05238328_05242974


Basic Information

Item Value
gene id CI01000010_05238328_05242974
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 5237029 ~ 5243396 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000010_05238328_05242974.mRNA
GTATAAAAGGCGTTCGGGGGCAGCTGAATTGTTAAGCCGTGTGTGTGTAGGTTATTGTCCGCCGGCCTGTTTTTTTCCCCCCTCAGACACACAGCGAGATAAATGTATTTTGGAACGGGGGGCATTGTACCACATCCACCAGCACAGGGAGGCATGGGGCACTATCATTTAGATAAAACAAATTACCAGCAGCCACAACGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAACATACATTGCAGCGAAGATAGAAAACGCCCAGCAGGTTCGAGATTCACCAGGCTCGCTCTCTCTCTCTCACATAGAGGGGCAACACAAAGCTATTTTCTCTGGCCAATAGCGGCGAAGCGGCGCGGGAAAGGCGAGCAGTAAATTCCCGCTGGGTAATTAAAATCAATAGCCACGACTCGCTCAGTAGCCAACAAGGTCAAACGCTGGAGAGGAACCGGGATAATGCCCAAACAGATAAATAAAAAAATAAAGTGAGGTGTCACGCTGTTTCATTAACCCTGCGTGGGGAGAGGTGTGTGTGTGTGTGTCTGCTTGGCAGGGTACTCGGGGTGCGTGGTGAACAGACACGGGTCCTGAACCTAACCCCACTCAAACGCAGGCCAAATACTGCAGCGAGCACAGCTAACACTGGTCATGAGACTCGCACATATACACACTGTATATAAACAGATATATGTGTCTGTTTATAAATGAAATATATTTGAAATTAGAAAATGTGCATGTGGAACTTATTTTATTGTTTTGTTAAACAGGAAAAAAAAAAAAAAAAAAAAAATGAAAGAAAAATTTTATTTAAATTGTAAAGTATGTACACAACTGTTTAAAATGTTCAAGTCTCTTCTGCTCACCAAGGCTCCTTTTTTTTTAATCAAAATACAGAAAAAAACAGTAGTTTTGTGAAATTGCTGTTTAAATATAAACAGAAATTACCATTTTGTTATATTTTACAATGTAATTTATTCATGTGATATGAGGATTCTTTGATGAATAAAAAATTCCAAAGAACAAAATGAAAATTTGGCAAAATTTGAAATAGAAATTTTTGTAATATTACAATTGTATTTACTCTCACTTTTGATCAATTTATTGCATCCTTAATGAATTAAAGTATTAATTTCTTTCACAAAAAAAAAAAATATATATATATATAATATATATATGTGTATGATATTTATTGGTATTTACTGGTATTATATGGTATTTATTGAACCTCTTTATTTAAAAAAATGTTGTTCTTCAATGCATTAAAAAATATTGTTTAAAATTACAATCGGAAATAATGGGAATAGTAACAGTAAAATACATTGCTGTCACAAGAATAAGGGGAGAAAAGCTAATTCACTTTCATTTCGGCTCAGCGGTTCACTTTGTTGAGGTTGCAGAGGAGTCTGTGTACATTCTGCATCAACCCATCCCAGCTCTGATCTTTCCTCTCTTTCTCATCTTCTCACTATCTCCCTCCCGCTGTTATTCCCTCCATTGCCTTCTATCGCAGAGATTGCCAGCTAAGAATGTGTATTACTATCGCTGCCCTGACCATCGGAGGAACTATGTGATGTCTTTCGCCTTCTGTTTCGACCGTGAGGATGACGTTTATCAGTTTTCATACTGCTACCCTTACACCTATTCCCGTCTGCAACATTACCTGGCCAGCCTGGAGCGCCGAAATCTCGATTACCTGCAGCGAGAGCAGCTGGGCCTTAGCGTGGTTAGTCACTGCATGTTTGCACATCTGTTTTACTGCACATCTTTGTAGCGTTTTAGGTGGTTTTGTCATTTTTTTGTTATGTTAGCATCTTCCTATATCTGCTGTGAACTGCACACTCATTTTCTTTAAGGGGGTGGACACATGTAAGTGTCTTTGAGGATGCATGACTGTGTGTGTGTGTGTGTGTGCGTGTGCATGATCTGCACAGGTACTGGATCATTCACAGTGCCTACAGTCCCGTCTCCGCTCTTATCAAATAATTGTAGAGGAAAACTCATTAGGAATGCTCGAGAGATTAAAGCCCTCTTTTAGGGCCTTCATCACTTTCACGTTCGTCAAGGAGAGCCAGACACGGGAAGCCACTGATGAAAGGACATTTATTGATAAGAAATATGGTGTCAATGGAAAAAAAAAAAGAAATCAGTTTCACATGAAATGGGATTTGAAAGGGCACATATATTGGGGGGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000010_05238328_05242974.mRNA True 2198 mRNA 0.39 4 5237029 5243396

Neighbor

gene id symbol gene type direction distance location
CI01000010_05185530_05200227 NA coding upstream 36515 5185121 ~ 5200514 (+)
CI01000010_05047527_05065421 NA coding upstream 170159 5047527 ~ 5066870 (+)
CI01000010_05012978_05018219 NA coding upstream 218683 5011379 ~ 5018346 (+)
CI01000010_04934550_04955403 NA coding upstream 280399 4933856 ~ 4956630 (+)
CI01000010_04871254_04873119 DMRTA2, DMRT5 coding upstream 363111 4870540 ~ 4873918 (+)
CI01000010_05308426_05318353 BEND5 coding downstream 64896 5308292 ~ 5319096 (+)
CI01000010_05359191_05385419 NA coding downstream 115795 5359191 ~ 5385684 (+)
CI01000010_05414058_05426498 NA coding downstream 170662 5414058 ~ 5426687 (+)
CI01000010_05477048_05482911 NA coding downstream 233129 5476525 ~ 5483301 (+)
CI01000010_05494740_05504597 NA coding downstream 250571 5493967 ~ 5505261 (+)
G63162 NA non-coding upstream 244539 4983616 ~ 4992490 (+)
G63151 NA non-coding upstream 283266 4953542 ~ 4953763 (+)
G63149 NA non-coding upstream 290361 4946465 ~ 4946668 (+)
G63359 NA non-coding downstream 326775 5570171 ~ 5579186 (+)
G63328 NA non-coding downstream 347980 5591376 ~ 5591852 (+)
G63332 NA non-coding downstream 390791 5634187 ~ 5638232 (+)
G63384 NA non-coding downstream 399481 5642877 ~ 5643077 (+)
G63386 NA non-coding downstream 401260 5644656 ~ 5645797 (+)
CI01000010_04640858_04683752 OSBPL9 other upstream 583036 4640516 ~ 4683778 (+)
G62983 NA other upstream 787702 4448172 ~ 4449327 (+)
G62856 NA other upstream 1297084 3937757 ~ 3939945 (+)
G62838 NA other upstream 1343236 3890095 ~ 3893793 (+)
CI01000010_03320340_03346243 NA other upstream 1905843 3313695 ~ 3347796 (+)
G63403 NA other downstream 452049 5695445 ~ 5707085 (+)
G63405 NA other downstream 464575 5707971 ~ 5717250 (+)
CI01000010_05789479_05790006 NA other downstream 513557 5788332 ~ 5790204 (+)
G63524 NA other downstream 1131162 6374558 ~ 6374667 (+)
G63572 NA other downstream 1342532 6585928 ~ 6617806 (+)

Expression


Co-expression Network