c17h2orf82 (cunh2orf82)


Basic Information

Item Value
gene id c17h2orf82
gene name cunh2orf82
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035913.1
NCBI id CM008316.1
chromosome length 28317440
location 13430528 ~ 13441256 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022678994.1
TCAGGACTGGGTCAAAAATCCTGCTCATGGTGCTCGTTATTCCTTTGCCCAGTTGGTAGGGTGGTGTTTATCAgtggctgcagcattttagaGAGTCAGTAAAAAGGTTGAGATCATTAATTAGATCTTGTGAGTCACTTTCTCACTGATTAATATGAGATTTATTTGATCTGATTGACCTGAGTGAAGACTGTTGAGAGTGGACCTGAACTGGGTGGGCTGTAAGCATAGGTGTTGACAATGTCCACACTGTCCACAGACCGGACCCCTCCCTtccccacccctctctctccctaccTCTCTACCTCTTCTACATTCAGCTCCTTGGTCTGGTAGAAGTGAGGAGAAGCCTTCGGTCCAGCCTAGACAACATGGCCTTTAGCAACAGCTCCAGCTCACAGTCCAGATTTCTCCTCCTAGCTGCCCTCGCCTTCTGCGTGGCTTTGGTACGGACAGAAACCGTCGGCGAGGTTTCTCCCACGCTACACAGCGACAACCAGGACACACTCTCTGGAGCAGGAGCACCAAATGATATCACAACGAAAGACCCCTATCAGGATGTGACACAAAGCACAATCACTGAATATGAGGACAGCACAGACACAGCGATTGTAGATGAAGAAGGTGTCCTGGGACCAGGTGCCATCACAGCCATAGTCATCGCAGTGTTCCTTGGCGCCTCTGTTCTCCTCGCCCTCATCGTCATCACACTCAGAAAATTCACCGCCTCCTAGACGTCTGGGACGACTTCCTGTTTTCCTCACTCTCCCAATCTCCCagtctttttgtcttttatgtTATGTCTTGTCCtgctttcctttctgttttgtttctagtatattataaaattaaaattattttaaatctgtCTCTTCTTATAAACATGTTGTGGGCCCTTAGCATCATTTCCCAAATATGCAAACATACTTTATGTAATAATTCTTTCTAAATTTCAGTATGAATTGTGTGGAACATACAAAATGAACCTCATGCATTAAGGGACAGTTTCCCATaaagggattaagcctagtctatgactacaaagctttttaaatggatattttcCAACAATTTAGTCTAGGACTTCCTCTGTAATTAGTCAGTTCAGCTACTTCATAGTGCACCTCTTGCTGACAGAGGCATTCAGTTGTGCACACACAACTTAGCAGTATAATCCCCATAGAATGGGATGCACATGACCCTAAGGTCACCATGCTCACTAACTGACCACACTAATGCTCTCATGGCTGAATGTTGTCAAATTCTCACAGAAATGTCCCAAAATCTAGTGGAAATAAAACCCAAGAGTAGAGATTCTCTCTTACTGCATCAAAGCACACTTATATTAGTCCTAAGCAGTAAAACCTATGCAGCCCATGTTTAACCCCTCCTTGTCCTATCATTGACCCTATTGGGGCCCATCATAGTTACCCATTTGTGGGGCCATTGAGGACAAAACGTTCTGGTTCCCACTTGGAGTACCCAAAAATGTTCCATAAAGGTGTGTTCTCTAAATGGCCTTGGATCTGATGTGGGTGGGGAACCCTGGTGCTAAATAGGTCATGAAACACTGTCAATGGCCCATGGCTGTATTTGGTGTGGGTGGGTTTATTCAGCTTGTGATTACATCATACAGCTTCTTGCTGTAATGAGAGGTGGGTCTAAACAGTGTAATGCGTATGGTCATTCTTTCAGAGTGTACTTATAGTTTTTTATAGAGCATATTTAATTCTTACCTTCATTTTTACACCATACatcatgttttattctaaacatttctttttgtttgtgtatgttACCTGAATTCTTCTAGTTGTGACTTTTTCATATTACTACCTGTTCTGTACTATTTAGATtaatagaaatattgtaatttttctatttttaagctGTATGCTATGTCTTTTCTCTTCGCAAATGTCATTGTAAAATAAGACTAGATCACGCTGAGCTGTGAAAGgttttaattattacatttaaagtttAGTTCTGTTCAAGAGTTCCAGTGTCCGGGTGTGTAAATAGTGCTTTGAATCTTCTAAATCCAAATTTAACCTTGACGTAAAATCATGCAACACCTGACATCGGAGGATGAATTTTGAAAAATGATtttcaaaatgtattaatattaataattgttttttgttctttttgctattttttgtgATTAGAGTTACATTAGGTTTAGTTAGAGTAATAGTAGTCTTGTTGATTATGTTACTGTAGATTGTTACTGTAATAAGATATAGAACTGTAgatttgtgtatgtttgtgttttagggtcagtttcccagacaggatTTAAGTTAGTTGTAGACTATATATTCCTTTTAATATTTACTcgccatttaaaatgctgtgtagtccaagactaaaCTTACTTCCTTTTTGGGAAACTGCTCTTTAATATTTAAGAATCAAAAATCTAGAGACTTTATTCTGATTTGTTGTATGAACACACCATGTTTAATCTGGGTCTGTATTTTTTAGAAGTTGCCAAGATCTGCttcaatttaattacaataaataaaaaactcctACTTCCACA

Function

NR:

description
PREDICTED: uncharacterized protein C2orf82 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022678994.1 True 2548 mRNA 0.39 3 13430528 13441256

Neighbor

gene id symbol gene type direction distance location
LOC103036611 gigyf2 coding upstream 741 13399299 ~ 13429787 (+)
itm2c itm2c,LOC107569273,LOC107698489,LOC107679406,LOC105018535,LOC107573001 coding upstream 71652 13349228 ~ 13358876 (+)
trnar-ccg_6 NA coding upstream 148827 13281629 ~ 13281701 (+)
trnar-ccg_5 NA coding upstream 149302 13281154 ~ 13281226 (+)
trnar-ccg_4 NA coding upstream 149760 13280696 ~ 13280768 (+)
trnap-agg_5 NA coding downstream 1585 13442841 ~ 13442912 (+)
trnai-aau_11 NA coding downstream 3540 13444796 ~ 13444869 (+)
trnag-ccc_1 NA coding downstream 39713 13480969 ~ 13481039 (+)
LOC103040694 pax3a,LOC108439877,LOC108280216,LOC107738801 coding downstream 63649 13504905 ~ 13544416 (+)
LOC103037413 foxl2 coding downstream 293553 13734809 ~ 13736617 (+)
G151565 NA non-coding upstream 47041 13383238 ~ 13383487 (+)
G151561 LOC103036308 non-coding upstream 52554 13376367 ~ 13377974 (+)
G151559 NA non-coding upstream 54966 13375176 ~ 13375562 (+)
G151518 NA non-coding upstream 134241 13294640 ~ 13296287 (+)
G151517 NA non-coding upstream 137843 13292331 ~ 13292685 (+)
G151570 NA non-coding downstream 4795 13446051 ~ 13452871 (+)
G151579 NA non-coding downstream 25297 13466553 ~ 13473868 (+)
G151614 NA non-coding downstream 121129 13562385 ~ 13564364 (+)
LOC111194545 NA non-coding downstream 227635 13668891 ~ 13673126 (+)
G151632 NA non-coding downstream 237718 13678974 ~ 13683113 (+)
LOC103039742 LOC108439864,LOC108280459 other upstream 95452 13297594 ~ 13335076 (+)
LOC107197015 NA other upstream 193791 13230102 ~ 13236737 (+)
LOC103033441 abhd8a,LOC108439870,LOC107696148,LOC107754588,LOC107687901,LOC107596234,LOC108280232,LOC103352801 other upstream 299075 13101394 ~ 13131453 (+)
LOC103033117 LOC108439884,LOC100333521,LOC107696163,LOC107750940 other upstream 320924 13103115 ~ 13109604 (+)
LOC103035375 LOC108427208,LOC108280686,LOC100331938,LOC107713688,LOC107600193,LOC107558294,LOC107729982 other upstream 1826487 11587909 ~ 11604041 (+)
G151621 NA other downstream 159353 13600609 ~ 13633602 (+)
G151634 NA other downstream 205424 13646680 ~ 13684847 (+)
pcp4 NA other downstream 317186 13758442 ~ 13762513 (+)
LOC103044755 LOC108443098 other downstream 479169 13920425 ~ 13943509 (+)
sirt2 sirt2,LOC107726128,LOC107655297 other downstream 647313 14088569 ~ 14095319 (+)

Expression


Co-expression Network