G82620


Basic Information

Item Value
gene id G82620
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 9136983 ~ 9138445 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU94005
ATATATATATAATTGCTGAATTTTTTGAGGTATCGGCAAATATCATATCTCTGGATCGGAGAATCGATAGAATATGGTCATACAGAATAAGTCTTTAAAATGTGCTTTATTAGCACTAATAAACAGCCAATGCGCATTGGGTTTCCATGTTTTATGGGGACTTTCCATAAATATAATGATTTTTGTACTGTACAGACTGTATAGTCTATTCCCTATCCCTGAACCTACTCATCACAGAAAACTTTCATTCTGTATGATTTATAAGTTGTTTTTCTAATGGCCCCACAAGGTCAAAGATTCACATAGCCATTACCAGGACCCCCCCAACACACACACACACACACACAATTATTTTCAAATACAAACATAGTAGGGATGAATGTTGCAGGTGCTGAAGTGGTGCATCACATTAGCAATTTTTATGAGCCCTTTTCTGAATAAATATTTGTTTGTGGAAGCACGTTTGTAAATGCTGCAAGTCACTGCTATTCTATTTCTGAAGATTTGTCTGCATCAACATCATTTGCATAAAAAACATCTGATTGGATGAGTCTTAGTCAAATATGTGCCTTAAAGGTTTGGGAAATTGGAGTAGCTCAAACATCCAGTGTGCTAATTGATTTCTGCTGAGTGCTTTTGAACCGCCTTTTAGATTTGCACATGAAGTGCTTTGATGTATTGGGCAGTGCAGCGATTCATCAAAATCAATCGAAGGGCCTTCAAAACATTTGTAACTGGATTTGGTTTATGGGGTCACTAGTTGATGAGCTCTGATATGGGCAATTATTGGTCTGGATGTGTCACTCATTGGCTTGATGTATCTTATTATATTTCTTCTGTCAGCTTTGATATCAGACAGAATGTGGAGTTACTGAGTGAAATGTGGAAATTTGTGGAATGGTTTTATTAAAGCCCTGGATACACTGCACGATTTTAGCAATCCAATAAGACCATTACTTTATCACACTGTGCGACATGGATCTACTAAACTTGGGTACGACATGCATGTAGACTGTACGATGATGACACCTATTGACTCGTAGGCTATGATGTTTTATGAAGTTTCTATAGAAGAATAAAACGTCATCAGCATGCGCTAGTGTTAAACAAAACACTATGTTGAATCACACTTTGGCAGTTGTAGTTTTTATGTGTGCTGAAAATAAAAAGGAAGCGGCAAAAGAAGAAGGGAAAAGAGCTTGAGGTAAGCAGTTTTAAGTTTTAGCACCATGTCCCGTTGATTTCATGTCACATTTTTATTGGCTGGTCAGTAGACGTAGGTCGTAGCAGCAAACACACTGTGCGATGATCATGCTGAATTTCTGACACTGTTAGAAAATGATCGTAGGCTATCTTTGGTCGCAAGACCGGGAAAACGGCCGTCTTTGAACCTCTCTCACTGTACGACATAGGAC

Function

NR:

description
PREDICTED: protein FAM83D-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU94005 True 1415 lncRNA 0.38 2 9136983 9138445

Neighbor

gene id symbol gene type direction distance location
CI01000013_09075883_09113011 NA coding upstream 23700 9075825 ~ 9113283 (+)
CI01000013_08943859_08944315 NA coding upstream 192358 8942838 ~ 8944625 (+)
CI01000013_08925040_08937556 CRACR2A coding upstream 198060 8924561 ~ 8938923 (+)
CI01000013_08652173_08660558 NA coding upstream 475912 8652173 ~ 8661156 (+)
CI01000013_08530191_08551478 NUP205 coding upstream 585362 8529349 ~ 8551621 (+)
CI01000013_09178561_09180465 NA coding downstream 38662 9177107 ~ 9195268 (+)
CI01000013_09243644_09260619 TSPAN9A, TSPAN9B, TSPAN9, TSN9 coding downstream 105199 9243644 ~ 9260619 (+)
CI01000013_09279917_09290301 TSPAN33B coding downstream 141472 9279917 ~ 9290760 (+)
CI01000013_09430170_09443518 RBM28 coding downstream 291725 9430170 ~ 9444023 (+)
CI01000013_09681047_09683275 LRRC4, LRRC4.2 coding downstream 542602 9681047 ~ 9683433 (+)
G82612 NA non-coding upstream 62407 9065133 ~ 9074576 (+)
G82557 NA non-coding upstream 154482 8982223 ~ 8982501 (+)
G82526 NA non-coding upstream 226357 8910397 ~ 8910626 (+)
G82503 NA non-coding upstream 290923 8834072 ~ 8846060 (+)
G82453 NA non-coding upstream 436144 8700616 ~ 8700839 (+)
G82638 NA non-coding downstream 98543 9236988 ~ 9237208 (+)
G82639 NA non-coding downstream 100936 9239381 ~ 9239585 (+)
G82580 NA non-coding downstream 228402 9366847 ~ 9388557 (+)
G82659 NA non-coding downstream 232063 9370508 ~ 9372174 (+)
G82666 NA non-coding downstream 242610 9381055 ~ 9384143 (+)
G82168 NA other upstream 1095640 8028338 ~ 8041343 (+)
G81994 NA other upstream 1798744 7335945 ~ 7338239 (+)
CI01000013_06076169_06080164 NA other upstream 3054616 6075400 ~ 6081684 (+)
CI01000013_06050285_06059640 NA other upstream 3077487 6049864 ~ 6060269 (+)
G80845 NA other upstream 4300751 4835078 ~ 4836232 (+)
G82581 NA other downstream 190884 9329329 ~ 9334948 (+)
G84005 NA other downstream 463166 9601611 ~ 9602235 (+)
G84194 NA other downstream 892163 10030608 ~ 10036953 (+)
G84215 NA other downstream 938009 10076454 ~ 10079336 (+)
G84250 NA other downstream 1076682 10215127 ~ 10215962 (+)

Expression


Co-expression Network