CI01000032_03323107_03325296


Basic Information

Item Value
gene id CI01000032_03323107_03325296
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000032
NCBI id null
chromosome length 4185905
location 3323107 ~ 3325637 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000032_03323107_03325296.mRNA
GTCACAACTTGCAAGGAGGATTACAAGTTCGATGCCCATTTAGAGGATGTGATAGCAAGTTCACTGTTGTGTCAAGTTTTGCATCTCATATTTCTAGGAAACACAAAAATGAGAGTGTTGTGCATGTAGATCCCTCTAATGTAGAAAGGTGCGTTGCCATGGAATATTTTCCTCAATGTGCACCCTCTGATCATTCTGATGATAAGCCAGAAGAGACTCTTGCTGTTGATGAATCCCTCTTTCTGCAAAATATCACACTCTTCTATCTTAAACTTCAGGCTAAACTACTGTTGCCTGCTACTACAATACAGACTATTATTGAGAGATATCAAGATGTCCATGATATCAGCCTGACAAATATGCTTAATATCTTAAGTGACAAATTAACTGTCCTTGGAGTCCCAGAGGCCACAATCAATAACATTATGGATGCATTCGAAGTTGTCAATCCACTTGGCTCTTCAAGAAAGAAACATAAGATTGCAGCAGTTTATCTAACTCTGACAGATATTTTGCCTCATAACAGATCCACCACAGACCAAATGCAACATGTTCTCTTGTGCAACAAGCAGGCCTTTAAATATTTTGGGATAGACAAGGTATTTGAGCCTCTCATAAAAGACCTGAAAGCTCTTGAGGAGACTGGTATTGTGATAGGTGATGGGCAAACTGTCAAAGGTCGACTGTGTGCTATCTCAGGTGACAATTTAGGGTCTCACAGTATCAGCGGTTTTGTTGAGAACTTCAGTAAGAGCCATTACTTCTGCAGATACTGTCATGTAGAAAGAGCTACTTTTCAGAACTCTCCACTATTGTGTGGCAACACACGAACAGAACAGTCCTATCAGAATCATCTGCAGGAATTAGGCACCAGTGGCAGAAATTCAGAGTGCGGCATTAAGTCAGATTCTCCTTTTAACCAACTATCCTTCTTTCATGTTTGCCAGCCTTGGCTGCCCCCATGTCTTGGGCATGACCTGTTTGAAGGCATTGTTTCGAGTGACCTTGCTTTGTTTATTGGTTATTTAGTTAAGGATAAACATTTCAGTTATCTACATCTCAACAGGTGCATAGATCAGTTTAAGTATCAGGTGAATGATGCCCACGACAAACCAGCCGATGTTTCACCAGGTAGCAATAAACTTACTGGACATGCAGCCCAGAACTGGTATTTCAATGCTGTTTGGCAACTTGTGCTGCAGCTTAGAGAAATTGTAGAACTCATTTGTGCACCAGCAATAGCAACGATTCAGGTCGCTTATCTTAAAATATTTATTGAGGACTACATACTGTATACTTTCAGATGTGCTAGAAAGTTGCACAATTTCAAAAACATCTGCAAGACAGTTGCCAAGCGACACCAGCTCTTCCAAGCCTATTTGAGTGCAGGCAAAATGTTCCAGCCGAGTGTGTTATTTGATAAGGGCACAGCATTAATTTGGAATTTTAAAGATACAGTAGCATCTCATGCGGTGACAGCGAAGGGCACTTCATACAAAAAGGGCATGTATATCTTGTTGGGGAAAACTGAAGAAGAATTGGAGGTTGGCAAGATAGAGCTGGTCATTGTTCACCATGGCTCTGTGTCCTTCATCTCAGAAAAATATTTGTTTGTGAAGTTGAGCGACATTGGGGTCTATTGCATATTAGGGCCAGCCCAAGAGCAGTCTGCATAAGAGGAGATCAGCAAGGCTGTCCTGGCTGCTCTTCCAGGGCTCCCCCCAAATCCTTGATGACAGGCCTGGAGAGCCTTGGTGTGCAGAGCAGGAAGGACCTCTGCTATTTAAAGGAAGATGATTTTATGATCTACCTCCGTCCAATCCAGTGCAGAAGGCTCATTTGTGCCTTTACACCAAAAGGTAATGGTTCTGTTAATATTTTTCAGTAGATTGAGATTCAGTTACACTTAAAGAACAAAAGGTGGTAAAACAAAAGACAAGTGGTCACTGCTTAAAGTAAGTTATGTTACCTATTCAATGATATATTATAGGAGAGGGACATGTTTATTGACATACGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000032_03323107_03325296.mRNA True 2017 mRNA 0.41 4 3323107 3325637

Neighbor

gene id symbol gene type direction distance location
CI01000032_03210864_03212974 TMEM129 coding upstream 108943 3210864 ~ 3214164 (+)
CI01000032_03168377_03169554 NA coding upstream 153360 3168281 ~ 3169747 (+)
CI01000032_03142737_03156736 NA coding upstream 164318 3141742 ~ 3158789 (+)
CI01000032_03083089_03083664 NA coding upstream 238961 3081983 ~ 3084146 (+)
CI01000032_03046961_03053202 RRAGA.L, RRAGB, RRAGA, MGC78980 coding upstream 269181 3046961 ~ 3053926 (+)
CI01000032_03326549_03327076 NA coding downstream 912 3326549 ~ 3328864 (+)
CI01000032_03535729_03536058 NA coding downstream 210092 3535729 ~ 3536863 (+)
CI01000032_03959089_03961976 NA coding downstream 633302 3958939 ~ 3962210 (+)
CI01000032_04115597_04116265 NA coding downstream 789960 4115597 ~ 4116316 (+)
CI01000032_04142554_04144115 NA coding downstream 813649 4139286 ~ 4144298 (+)
G166819 NA non-coding upstream 87540 3221575 ~ 3235567 (+)
G166816 NA non-coding upstream 101586 3214622 ~ 3221521 (+)
G166857 NA non-coding upstream 127003 3194034 ~ 3196104 (+)
G166861 NA non-coding upstream 212762 3110142 ~ 3110345 (+)
G166860 NA non-coding upstream 215956 3106747 ~ 3107151 (+)
G166974 NA non-coding downstream 116071 3441708 ~ 3441992 (+)
G167039 NA non-coding downstream 219916 3545553 ~ 3546243 (+)
G167077 NA non-coding downstream 283961 3609598 ~ 3689130 (+)
G167111 NA non-coding downstream 328491 3654128 ~ 3654454 (+)
G166765 NA other upstream 365894 2956788 ~ 2957213 (+)
G166734 NA other upstream 473423 2835314 ~ 2849684 (+)
CI01000032_02773889_02774396 NA other upstream 547059 2773889 ~ 2774501 (+)
CI01000032_01698448_01701006 NA other upstream 1621819 1698448 ~ 1701288 (+)
G165570 NA other upstream 1965540 1349578 ~ 1357567 (+)

Expression


Co-expression Network