CI01000032_04142554_04144115


Basic Information

Item Value
gene id CI01000032_04142554_04144115
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000032
NCBI id null
chromosome length 4185905
location 4139286 ~ 4144298 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000032_04142554_04144115.mRNA
CTATTAAAGCGGCACGGAGCTCCACGTTAAGCAGCCATCTAGCCTCCAAGTGTAATGTGAAAGAAATGAAGTCATACTGGATTGTAATAAGTGAAGATGCTGCGATCTAGACAGATCTGTTAGTGTTTAATGTTCTGTGGTCTGAGTTTTTGAGGACACCATTGTGCTGAAGAGTAGAGCTAGTGCTTTAGTCAATGCTGAGCTCAGAAACACTGATGTTATGCTGCATGTTGCTTTATTTAAAGGCAATAACTGTGTAGTTGCTGATGGAGTGGTAGTTATATCAGCTCATGCATGTGTACTGTTGCTAGTTAATTGTTAACTAAAAGACATTTATGTTTTACAGAAAATGGTTTAATTTTACAGTTTTGTTTGGCAGAGACTTCTGCCAGTCATTTCTTTTTTAATGATCTTTATCTGTTGTTTTCATTAATGGTAAACGTTTGGCATCCTGTGCTCCCAGATTTACTGTTGTAGATTAATAGTCCGGGCACTGTGTGGGCCTAGTGAGGGCTTCCTGGGGGCTAAGTGAGGGCTGCCCGTGCAGGGCCAGCGCTAAGGGGCCAACGTTTTGCCAACGAGCAAATTCTCAGGTACCCTGTGCTGGCAGCCTGTTGGGGGCCCTTACGCTAGCCCTAAGTGGGCCATCCCTTACGGAACAAAAATATATGGGAATATACTGCAAAATATAATGTGATATATTACATAATACGGTAACACTTTATTTTAGGGTCTTTTAACTAGTTGCTTATTAGCATGCATATTACTAGAATATTGGCTCTTTATTAGTACTTATTAACCACATATTAATGCCTTATTCTGCATGACCTTATTCTACATTCTTAATCCTACCCAATACCTAAATTTAACAAATAACTTACTAACTATTAATAAGGAGTAAATTAGGAGTTTATTGAGGGAAAAGTCATAGTTAATAGTTTATATGTGTTCCCTATACTGAAGTGTTACCCATAATACATTTCCATATATGGGAAACTAGTGCTTATATTTTTCAATATACTGCAATATACCTGTATGCATTGATCATGTATGGCTAAATATTGATACATATCAAATATGTATAATAGCATTACATTCATAAAGATTTATCCTTTATTGTGTACATATATTGCACATACATGTTCCCATATAAATGTGAATGTATTGTACACACATATATACACACATTCATGGAATAAGTTACAATCAGTGGTTACAACAGACTTCTAGTTCCCAGCATGCTTTGCTTTTTACTGTTAAAGGAGAGTAAATGTTAAAATGAAGTGCTATTTCATGTGTTTTGCTCAATATTGATATAGGGGGAGATCTGTTAGTGTTTAAAGTTGTATTATTTTGGAATTTAAAAGGTTTTCTGGTATGTGTGAGTTTTTGGGGTTACCATTGTGCTGAAGAGTAGAGCCTGTGGTTAGGTTTATGATTGGCTGAACACCATTAAAACTATAACAACTTTATTTAAAAAGTAACAGCTGTGTGTGTGCTATATTACAGTGACAGCCTTTTGGTAAAAACTTTAGTACATGCAGGTGTGCTTTTGTTAACTAGCTTGAAAATATGAAACGTTTAAAGTATAAATAATTATGAAGTGTAAGAAATGTGTTACATAAGATATTTTACCATATATGTGTTTATACTGTATGAGTAAATATATCTGCAATATATTATGCATGCTGTACCATATCTGATCACATATAAATCTATATATTATGAAGTATATTACTGAATATAAAATTACATACATTATGATATATTAGTAAATAAATTATCACATATTTTTCAATATATGAAAAGCTGCAATTCCTTATGTATTATTCAATATATTGTAATAAATTTACGCAATATATTTTTTCGGTATATTTTCAAATATTCTGTTAAATCATGTGATATATTGATCATTCATATATAGGGAAATATATTTTCTTTCCATAAGGGGTAAAGGGCCAGTGCAGGCTTGTTTGCAGGGCATACTTCACTCCAGAGCTCCATCCACAAGGAAACTTTACACCCTGAAGTGGAAACTTTTCACTTCTTGGTGTGATATGCGACAGTTAGATCCAGTAAACTGCCCAGTCGGTTCAGTGCTTGAGTTCTTACAAGATAGCTTTTCATCAGGGCTAACCCCGTCTACACTAAAGGTGTACGTGTCAGCTATTTCTGACAATCATGCTCCTTTGGATGGGACAACTGTGGGGAGAAACCTGTTGATAACCCGTTTCCTTCATGGTACTTTGAGGCTGAGGCCTGCAACACGTACCAGGGTTCCTGCTTGGGACTTGGCCATTGTTTTAGAAAGTTTATCTAAAGCTCCCTTCGAGCCACTTGATTCGGTTGCAGAAAAGTTTCTGACTTTAAAAACCATCTTTCTTCTAGCCATCTCGTCACTAAAGAGAGTAGGAGACCTCCAGGCCCTATCTATATCCCCATCATGGCTTGAGTTTGCACCGGTGATGGTCAAAGCGTTCCTTTACCCTAAACTGGGATACGTCCCCAAGGTTCCGACCAATACACCACGGCCTATTGTGTTCCAAGCTGTCTGTCCTCCTCTGTTCTCTGAACCAGACCAGGAAAAGTTGAATCTTTGAATCTATGTATAGAAAGTTCATGATCAAGGACTCTTGGGACAGAAATATGTCAATTAGGTCAAATATGCAATACTCTATGGCTGACGTACCATCAGGAGTCAATGTGTACGTATAAAACGTTTATGATTGAGGACTAATTTTCCAGAAAAATGTTTAGTAGGTCAAACATGGGCCCATGTATGGCTGAAGTAACATCGGAGTGAGGCAATGAGTTAGGTATAAAAAGTTTGTGTTCAAGGACTCTTTGGACAGAAAAAATTTAAGTAGGTCTAATATGAACTACTGTTCTTCTGATGTAAAATCAGAATGAGTCAATGAATATGTATAGAAAGTTCAAGATTGAGTAGTCTTGGGCCAGAAATATGTTCATGTTAAACATGGACTACTCTCTGTCTGATGTAACATTAGAATCCGACTGATCCGACACTGATCCGACACCATGTTCCAGATAAGATCAGGGACCTCATTCTGAACTATTATAGCTGCTTTAGTTTGAGAGTCACCTCTGGATCAATAACGTCTGCGTTTCATAGGCTGGAGAAAGGAATAATCACAGGGTGGTCAGTGATTTTGTTCGCTTTAGCTATATGTTAGTTAAGTCAGCTGAGGTGGAATGCAGAGGCCCACTTACCCGGTCAGGTGTGCATCAGGCCCCTATTAGAGCATTTATGGATGATCTAACGGTGACTACAACATCCGTACCAGGCTGCAGATGGATCCTCCAAGGCCTTGAACGTCTTATCAGCTGGGCCCGAATGGACTTTAAACCAGCCAAGTCGCGATCACTGGTGGTGAAGAAGGGAAAGGTAACTGACAAGTTCTGTTTCTCCATGGGAGGAGTCCAAATTCCATCAATTACAGAGAAGCCGGTTAAGAGCCTGGGAAAAGTATTCAACAGCACACTTAGGGACACAGTCACACTTCATGAAACTGGGAAAGAGTTGCACACTTGGATTGCTGCTGTGGACAAGTCAGGGTTGCCAGGAAAGTTTAAAGCCTGGATTTACCAGCATGGCATCCTGCCGCGAATCCTCTGGCCACTGCTGGTTTACAACGTCCCCCTAACCACCGTTGAGAGCTTTGAGAGGAAGATCAGCCACTCTCTGCATAGGTGGTTGGGTCTCCCACGAGTTCATGGTTTTCTGAGCAAGAGAGGTGTTGCTGCTGGCATAGAGGTGAGGACGGTTAGGAAGTGGAGGGCCCAGGAGGCTGTCGACCAGGCTGAAGCACGGTTGAGGCCCAGTGTGCTGGTGGGGACAGTGGCATCAGGACGAGCAGGGCTTGGTTGTATCCAAAGTTCTCGATACAACAAGGCCCGGGGAAAGGACTGGCGTCTACTGGTCCAAGAGGAAATCCGAGTAGGGGTGGAGGAAAGACACATCTGTAGGATGGTGGGGATGCGACAACAAGGGGCCTGGATGTGGTGGGAACAGGTGATGGGCCAAAAGATCTCGTGGACTGACCTGTGGAAAGCGGAGCCACACCAGATTCAGTTCCTTATCAAATCAGTCTACGATGTCCTCCCCAGTCTAACCAACCTCTTCTCTTGGGGCCTGATAGACACCCCTGCATGCCCACTATGTCAAAAAAGAGGATCACTGGAGCACATATTAAGCTGCTGCCCTAAAGCCCTGGGAGAGGGGCGTTATCGCTGGCGCCACGACCAGGTGTTAAGAGTCATCGCAGAAGCCATCAGCACAGGGATCTCTATCAGCAGGCATCAGCAGCCAGCACAGCGTTTGATTGAATTTGTCAAGGCTGGAGAGAAACCACCACACAGCAGAAACCCATCTGGGGGACTGCTGGCAACAGCCTGGGACTGGCAGCTAAAAGTCTACCTGGGAAGGCAGCTCAAATTCCCAGAAACCATCACCAAGACCATGCTTAGGCCTGACATGGTCCTCCTTTCAGAAGCATCAAGGCAGGTGGTCCTATTGGAATTGACTGTGCCCTGGGAAGACCGAATGGAAGAGGCATTCGAACGAAAGCTGGCCAAGTACAAGATGAATGTCGTAGCAGCGGATGGAAGACCTGCTGCCTCCCCATTGAGGTGGGCTGTCGAGGGTTTGCCGGCCAGGCGCTCTGCAGGGCCCTCAAGCTCCTGGGAATCAGGGGACTGCACACAAAAAAGCCATCAGGAACATCATGAATGCTGCTGAGAAAGCATCTAGATGGTTGTGGATCAAAAGGGGTGATCCGTGGACCGCACAAGCTACCTAGACACAAGTCGGGGACTGATCACCCCTGGCTGGGTCGCCTGGATGTTGTTGAAAGACGCGAAACACCCAATGACCCCAGGTTACATCACTGATGATGTGTCTAGGTTGCACCTGTAAGGTGTA

Function

NR:

description
lambda-recombinase-like protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000032_04142554_04144115.mRNA True 4942 mRNA 0.43 2 4139286 4144298

Neighbor

gene id symbol gene type direction distance location
CI01000032_04115597_04116265 NA coding upstream 22970 4115597 ~ 4116316 (+)
CI01000032_03959089_03961976 NA coding upstream 177076 3958939 ~ 3962210 (+)
CI01000032_03535729_03536058 NA coding upstream 602423 3535729 ~ 3536863 (+)
CI01000032_03326549_03327076 NA coding upstream 810422 3326549 ~ 3328864 (+)
CI01000032_03323107_03325296 NA coding upstream 813649 3323107 ~ 3325637 (+)
G167371 NA non-coding upstream 18418 4075445 ~ 4120868 (+)
G167327 NA non-coding upstream 133917 4004929 ~ 4005369 (+)
G167325 NA non-coding upstream 134482 4003583 ~ 4004804 (+)
G167324 NA non-coding upstream 136296 4002791 ~ 4002990 (+)
G167323 NA non-coding upstream 137359 4001584 ~ 4001927 (+)
G167404 NA non-coding downstream 1821 4146119 ~ 4146336 (+)
G166765 NA other upstream 1182073 2956788 ~ 2957213 (+)
G166734 NA other upstream 1289602 2835314 ~ 2849684 (+)
CI01000032_02773889_02774396 NA other upstream 1363238 2773889 ~ 2774501 (+)
CI01000032_01698448_01701006 NA other upstream 2437998 1698448 ~ 1701288 (+)
G165570 NA other upstream 2781719 1349578 ~ 1357567 (+)

Expression


Co-expression Network