G204504


Basic Information

Item Value
gene id G204504
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000048
NCBI id null
chromosome length 1528931
location 561726 ~ 562250 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU232121
AATAAATTCCTGTGTATTTCCTACCTGACAGGAAGGAATGCCACAGGTAAACATGACATTTATTTTAATGGATTATATATGTGTGTCACAGTCTCCGTCTGTCCTGGACTTCATTTCCCATCGTCCTCCCTGGCCCTCACCTGCACTCACTTCACCATCAGCTAATCTCACACACCTGTTCCCCATCAGCACTCAATCACATGACTATTTAAGCACACCACTCACCTCCCTCAGTTGTCCGGTCTCATTTATGCGTTTATACTAAGGACTATTCATGTTGATCTCCAAGACTTCTAAGATACTTACCTGTTCCACTCCAGCGTGTTTCCCCAGTCTCCGTGTTTTGTCGTCTGTGTGAGTTTACCCACCTTCAACGTGTGTTCATCCTGTCTACTGTCATCCATCCATCCACGATCTGCAAACCTGTAAGACAAAGGACTGTATCAGTGTTCAGCTAGCACTTTACTAAGATTCCATCTCCTACCCACTCACCTGCATTTACTGTGTTTATCCTGCTGTTTGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU232121 True 525 lncRNA 0.45 1 561726 562250

Neighbor

gene id symbol gene type direction distance location
CI01000048_00425103_00519682 NA coding upstream 41836 425103 ~ 519890 (+)
CI01000048_00403297_00404487 NA coding upstream 157112 403232 ~ 404614 (+)
CI01000048_00261577_00264226 NA coding upstream 296184 261400 ~ 265542 (+)
CI01000048_00149401_00154452 NA coding upstream 407274 149401 ~ 154452 (+)
CI01000048_00036432_00113057 PSIP1 coding upstream 448669 36432 ~ 113057 (+)
CI01000048_00567988_00568484 NA coding downstream 5738 567988 ~ 569052 (+)
CI01000048_00659494_00667971 NA coding downstream 96772 659022 ~ 670072 (+)
CI01000048_00693752_00694265 NA coding downstream 130822 693072 ~ 694474 (+)
CI01000048_00705234_00707566 NA coding downstream 142611 704861 ~ 707608 (+)
CI01000048_00713811_00714700 NA coding downstream 151229 713479 ~ 714947 (+)
G204457 NA non-coding upstream 14638 531657 ~ 547088 (+)
G204461 NA non-coding upstream 79478 432327 ~ 482248 (+)
G204459 NA non-coding upstream 90931 467709 ~ 470795 (+)
G204454 NA non-coding upstream 94921 464903 ~ 466805 (+)
G204503 NA non-coding upstream 152176 409272 ~ 409550 (+)
G204506 NA non-coding downstream 9497 571747 ~ 572993 (+)
G204505 NA non-coding downstream 10747 572997 ~ 575340 (+)
G204507 NA non-coding downstream 17215 579465 ~ 579735 (+)
G204508 NA non-coding downstream 17837 580087 ~ 580367 (+)
G204509 NA non-coding downstream 19413 581663 ~ 583190 (+)
G204472 NA other upstream 200065 361025 ~ 361661 (+)
G204409 NA other upstream 275979 285270 ~ 285747 (+)
G204233 NA other upstream 498129 63188 ~ 63597 (+)
G204824 NA other downstream 431205 993455 ~ 993969 (+)
CI01000048_01214358_01215546 NA other downstream 652122 1214358 ~ 1215807 (+)
G205026 NA other downstream 820705 1382955 ~ 1383698 (+)

Expression


Co-expression Network