G204888


Basic Information

Item Value
gene id G204888
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000048
NCBI id null
chromosome length 1528931
location 1077400 ~ 1077699 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU232571
GAAACAAAACCCATTCAAAAATGTTGGGGAGATTCACAAAGAGTGGACTGCAGCTGGAGTCAGTGCTTCAAGAACCACTACGCACAGACATATGCAAGACATGGGTTTCAGCTGTCGCATTCCTTGTGTCAAGCCACTCTTGAACAACAGACAGCGTCAGAAGCGTCTCGCCCGGGCTAAAGACAAAAAGGACTGGACTGCTGCTGAGTAATGAAAGTAAATTTTGCATTTCCTTTGGAAATCAGGGTCCCAGAGTCTGGAGGAAGAGAGGAGAGGCACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU232571 True 280 lncRNA 0.48 2 1077400 1077699

Neighbor

gene id symbol gene type direction distance location
CI01000048_01067628_01068912 NA coding upstream 7057 1067366 ~ 1070343 (+)
CI01000048_01003499_01009234 NA coding upstream 66888 1002748 ~ 1010512 (+)
CI01000048_00809677_00812096 NA coding upstream 264240 809677 ~ 813160 (+)
CI01000048_00713811_00714700 NA coding upstream 362453 713479 ~ 714947 (+)
CI01000048_00705234_00707566 NA coding upstream 369792 704861 ~ 707608 (+)
CI01000048_01136676_01137044 NHLH2 coding downstream 58113 1135812 ~ 1137372 (+)
CI01000048_01214358_01215546 NA coding downstream 136659 1214358 ~ 1215807 (+)
CI01000048_01224995_01226178 NA coding downstream 147158 1224857 ~ 1226178 (+)
CI01000048_01299946_01304448 PCDH8 coding downstream 221857 1299556 ~ 1304886 (+)
CI01000048_01322005_01325973 SLITRK5B coding downstream 244306 1322005 ~ 1326130 (+)
G204855 NA non-coding upstream 51883 1025136 ~ 1025517 (+)
G204843 NA non-coding upstream 63429 1013763 ~ 1013971 (+)
G204827 NA non-coding upstream 81974 995224 ~ 995426 (+)
G204826 NA non-coding upstream 82177 995003 ~ 995223 (+)
G204824 NA non-coding upstream 83431 993455 ~ 993969 (+)
G204917 NA non-coding downstream 37866 1115565 ~ 1117584 (+)
G204966 NA non-coding downstream 169944 1247643 ~ 1254994 (+)
G204965 NA non-coding downstream 190812 1268511 ~ 1268931 (+)
G204970 NA non-coding downstream 197069 1274768 ~ 1347755 (+)
G205000 NA non-coding downstream 279298 1356997 ~ 1362395 (+)
CI01000048_00659494_00667971 NA other upstream 415544 659022 ~ 670072 (+)
G204472 NA other upstream 715739 361025 ~ 361661 (+)
G204409 NA other upstream 791653 285270 ~ 285747 (+)
G204233 NA other upstream 1013803 63188 ~ 63597 (+)
G205026 NA other downstream 305256 1382955 ~ 1383698 (+)

Expression


Co-expression Network