CI01000048_01224995_01226178


Basic Information

Item Value
gene id CI01000048_01224995_01226178
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000048
NCBI id null
chromosome length 1528931
location 1224857 ~ 1226178 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000048_01224995_01226178.mRNA
ATATAAAAACACACCTTGCCTTCACCTTCACCTTCAGCACAGAGAGCTGCAGGTAAGAGTGAACAGACAAACATCTCCAGCAGAACAATTATTCTTCAGCATATGACCTAATTCAAACCTGATTTTCCTCAGGTACACATGGAGGGGTCCGCCATCGTCCTGTTACTGCTGTGTTTTGATAGTTCACTCAGGTTCATTACTGCTCAGACAGCAGATCCAGGATGGTCAGCAAAGAATATCTCATGGAAATCACCGGAAACCACAGCAAACAAAACCCCGATGTGCTCAGGACCAGTGCGGATCAGAGATGCCTTCAAGTACATCAACAGCATCGTCTCGTGTTTGGTGCTGCTGTTTGGGATGGTTGGAAATGTGACTCTTCTGAGAATAATCAAAGAACACAAATGCATGAGAAATGGACCCAATATTCTCATTGGCAGTCTGGCACTGGGCGATATCTTACACATCGTGATTGGGATACCCATCAATGTTTATAAGCTTCTGGCGGTCGACTGGCCATTTGGTGTCCTGCTCTGTAAACTGGTGCCATTTATTCAGAAAACCTCTGTTGGGATCACAGTCCTGAGCCTGTGCGCTCTGAGTATAGACCGGTACCGAGTTGTTTCATCAACGAGTCGCACCAAAGCTCTCGGTTTTCCCAAGTGGACTGTCATCAAACTGTCTTTAATATGGACCATATCAACATTACTGGCGGTTCCGGAGGCCGTTGCGTTTGATCTGATTGCGATGGATTACAGAGGCGAGCGTCTGCGGATCTGCCTCCTTCATCCTGTACAAGCCACTCGGTTTATGCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000048_01224995_01226178.mRNA True 816 mRNA 0.47 3 1224857 1226178

Neighbor

gene id symbol gene type direction distance location
CI01000048_01214358_01215546 NA coding upstream 9083 1214358 ~ 1215807 (+)
CI01000048_01136676_01137044 NHLH2 coding upstream 87485 1135812 ~ 1137372 (+)
CI01000048_01067628_01068912 NA coding upstream 154514 1067366 ~ 1070343 (+)
CI01000048_01003499_01009234 NA coding upstream 214345 1002748 ~ 1010512 (+)
CI01000048_00809677_00812096 NA coding upstream 411697 809677 ~ 813160 (+)
CI01000048_01299946_01304448 PCDH8 coding downstream 73378 1299556 ~ 1304886 (+)
CI01000048_01322005_01325973 SLITRK5B coding downstream 95827 1322005 ~ 1326130 (+)
CI01000048_01357896_01360700 NA coding downstream 130934 1357112 ~ 1360744 (+)
CI01000048_01374716_01392617 NA coding downstream 148538 1374716 ~ 1392617 (+)
CI01000048_01482623_01492925 NA coding downstream 253561 1479739 ~ 1493233 (+)
G204917 NA non-coding upstream 107273 1115565 ~ 1117584 (+)
G204888 NA non-coding upstream 147158 1077400 ~ 1077699 (+)
G204855 NA non-coding upstream 199340 1025136 ~ 1025517 (+)
G204843 NA non-coding upstream 210886 1013763 ~ 1013971 (+)
G204827 NA non-coding upstream 229431 995224 ~ 995426 (+)
G204966 NA non-coding downstream 21465 1247643 ~ 1254994 (+)
G204965 NA non-coding downstream 42333 1268511 ~ 1268931 (+)
G204970 NA non-coding downstream 48590 1274768 ~ 1347755 (+)
G205000 NA non-coding downstream 130819 1356997 ~ 1362395 (+)
G205260 NA non-coding downstream 276219 1502397 ~ 1502714 (+)
G204824 NA other upstream 230888 993455 ~ 993969 (+)
CI01000048_00659494_00667971 NA other upstream 563001 659022 ~ 670072 (+)
G204472 NA other upstream 863196 361025 ~ 361661 (+)
G204409 NA other upstream 939110 285270 ~ 285747 (+)
G205026 NA other downstream 156777 1382955 ~ 1383698 (+)

Expression


Co-expression Network