CI01000048_01357896_01360700


Basic Information

Item Value
gene id CI01000048_01357896_01360700
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000048
NCBI id null
chromosome length 1528931
location 1357112 ~ 1360744 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000048_01357896_01360700.mRNA
ATATAAAAAACACCATATAAGTTATATTTTACTTCACTTTATTAACATGAAGCAAAACAGAGAAAAAGGAGAAAACAATAATTATTCGAAAATGTGAATTCTAATTATAAACTTAATACATATAGCTTTTTATAATAATTCCCCAAATATTAATTCAATACCTCACACGCTTGTTTTACAAAATACAAAATGAGAAAACGATAAAGATGTGCAAACATGTACAAAATACAGACATAAATATAAGCAACTATAACATACACATCAATATTTAACATCTTAGATATCAGTAGATTAAAAACATCTGTTCTTTATATATTTTACTTTTAGTTATATTTTACTCCACTTTATTAACACCGAAAGCAAAATAAAGAAAACTAAGAGTTAAAAAATGTGAATTCTGATAAATTAATAATACACTACAAAGACAGGCCTATATATAGTCTATATAATAATTCCCCAATTATTAATTTGACTAAGAAGGTTCCTGTCAACATGGTCGCAGTTGTTTACAGTAGTGTTTGACTGTAGTAACGCTTGCTGGATTGGCGGATGGAGATCGGAAGTAGTTTGTTCATGCTAATGAAGGAGTTGGGCTTGTGGATATTTACGTTCGACGGGAGCCGCCCTTCATTCACCACATGGTTAAAAGCTGAGCGCGTTCGCGCCACTTTCGCAATTTTACTACGCTTTTGTAACGCTGCCCACGGCGTGCTCGGACGCGTCGCGTGGTGATGGTTTATTTCTCCCAAGTTTGTCGTTTAGTTTCGATGATGTGCCCGGAGCGATGACAGCGAACGGTAAGTGTGTACAACGATTCACTTGGCGGAGTCTAGAACGTTCTTGTGTGAACGGTTCAGTTTATTACATCACACGACTGATGAGGAGAAGCAGTTTTAGCTGTAGTGAGAGGCGCGTGGAAGCCCACCATAGTTGTGAGAATGAGGGAGATTTGAAAAGCGTGCGCGAGGCTGCTGCAGTGCCAAACCAGCGCTCGCGCCGGAAGATCCGCCTCCTGACCTTTCGGATGGCGTTCGGATCCCCCGGCGCGCCCCGTCCCCCGTGGATCTGTCCGGCGTGTCAGCGCAGAGTCAAAGTGCTTACAGTGCAGTTTTGCTGGTTTGCAGTCAGCGTTCCTGTCGTTGCTGTGCAAATCCATGCAAAACTGATCATAGCAGTGAGGAGTCTCCGCTTCCCGCCGTCAGATCCCCCAGCATCCCTATCTTCGCAGGTCGGGATCGGCCGCAATGCTCTGCGCTGGAAGTATTGCACTTGTCCCGGCCTGTGAAGAGCGCGGAAATCCTTCGGCTGCTCCTGTGCGCTTGTCTTCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000048_01357896_01360700.mRNA True 1329 mRNA 0.43 4 1357112 1360744

Neighbor

gene id symbol gene type direction distance location
CI01000048_01322005_01325973 SLITRK5B coding upstream 30982 1322005 ~ 1326130 (+)
CI01000048_01299946_01304448 PCDH8 coding upstream 52226 1299556 ~ 1304886 (+)
CI01000048_01224995_01226178 NA coding upstream 130934 1224857 ~ 1226178 (+)
CI01000048_01214358_01215546 NA coding upstream 141338 1214358 ~ 1215807 (+)
CI01000048_01136676_01137044 NHLH2 coding upstream 219740 1135812 ~ 1137372 (+)
CI01000048_01374716_01392617 NA coding downstream 13972 1374716 ~ 1392617 (+)
CI01000048_01482623_01492925 NA coding downstream 118995 1479739 ~ 1493233 (+)
G204970 NA non-coding upstream 9357 1274768 ~ 1347755 (+)
G204965 NA non-coding upstream 88181 1268511 ~ 1268931 (+)
G204966 NA non-coding upstream 102118 1247643 ~ 1254994 (+)
G204917 NA non-coding upstream 239528 1115565 ~ 1117584 (+)
G204888 NA non-coding upstream 279413 1077400 ~ 1077699 (+)
G205260 NA non-coding downstream 141653 1502397 ~ 1502714 (+)
G204824 NA other upstream 363143 993455 ~ 993969 (+)
CI01000048_00659494_00667971 NA other upstream 695256 659022 ~ 670072 (+)
G204472 NA other upstream 995451 361025 ~ 361661 (+)
G204409 NA other upstream 1071365 285270 ~ 285747 (+)
G205026 NA other downstream 22211 1382955 ~ 1383698 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) G71596 NA non-coding CM030128.1 CM030128.1 24332431 ~ 24333297 (+)