RNA id: XM_043254861.1


Basic Information

Item Value
RNA id XM_043254861.1
length 7343
RNA type mRNA
GC content 0.47
exon number 23
gene id golga4
representative False

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 19363572 ~ 19399890 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCTCTTCACTTTTTCCTCCACGTCAGCTGCATCTGCGCACTGCTCCCGGCCACACATACATTAAGTTTCTCACACTGATAATCGGACGGTGAAATCTTCCCTGACGTGACAATAATCGCATGGAGTGATGTTTAAGAAACTGAAGCAGAAGGTGATAGACGAGCAGTCGCCTCAGCGGAGCAGCACGCAGGCGCAGgtGAGTTCAGGAGAGAGGCGCGCTCAGACCCCTTTCCTGCACCAAGATGCCCCGGCCTCCCCCAGCGACAGAGAGAAAGAGGAGTCTCAGTCTCTGGCCCAGAAGCTGCAGCAGAAGGTTTCTTCCGTGGAGTCTCTGCTCCGGGGTTCGGCCCGCGGTGAAGGGCTCTTCCGCTCCGGCTCCCGGGACAGTCTGGTCAGGAGCTCCTCCAGAGAATCGCTCACCCTCATCGGAGAGAATGAAGCCCAGTCGTCGCCGGCGTACGACCCTCCGTCGGACATCGAGAGCGAGGCGGAGGATTCGCCCGGCAGCGCTGAGAGTCTGTCCAAAGAGCAGCTCCTAAACCATCTGCACCGGGTCGAGAGGAGCCTCGGGAATTACAGGGGAAAGTACTCGGAGCTGGTTACAGCTTACCGAACCGTACTCCGGGATAAAGAGAAAACGCAGgcCATCCTCAGCCAGAGTCAAGATAAAGCCCTGAGAAGAATAGGGGAGCTCAGGGAGGAGCTTCAGATGGATCAGCAGGCCAAGAAACACCTGCAGGAGGAGTTTGATGCTGCTCTCGAGGAGAAGGACCAGATGATCACTGTGCTTCAGACACAAGTGTCTCTCTTGAAGAAACGTCTGCAGGCGTCCGGAGGTGTGCTTTCCTCAGAGGCCGAGACATCTCAGTCCACAGATACGGTGGATGCAAACACTGACATCCAGAGCCCTTCGAAAGACGACAGCTCGACCCTCAACACAGAAGGCGGCGGAGAGCCGGGAAGCGCCTTGGACCTCGAGGCCCTCCAGAAGCGAATCAAAAGGCAAGAGAGTCTCCTGCAGAGATGTAAAGAGATGATTCGATCCAGTAAAGAGCGCTCTGCTCAGCTGACCAGCGAGAACGAGGTTTTacagcagcagctgcaggagAGACTGCAAGAGCTTGAGAAAATGAAGGAACTTCACACTACAGAGAAGACGAAGCTGATCACGCAGCTGGGAGACGCCAAGAACCTCATCGAGCAGCTGGAGCAGGacaagGGAATGGTCATCGCTGAAACCAAGCGTCAGATGCATGAGACTTTGGAGATGAAGGAAGAGGAGATCGCTCAGCTGCGCTCTAGACTCCAGCAGACCCTCGCTCAGAAAGATGAGCTGCAGGAGCAGAAAGAGAAATCGGAGAAAGCAGCGTTTGAGGAGCTGGAGAGAGCTCTAGGTGTGGCTCAGCGGGCGGAGGAGGCTCGCCGTCAGCTGCAGGTGAGCATGGAGGAGCAGGTGAAGCAGGTGGAGAAGGCCAgcgaggaggagaggagaagctTGCAGCAGGAGCTGACCAGagtcaaacaggaagtggtcACCATTATGAAGaaatCCTCAGAGGACAGGATAGCAGAAATGGAGCGGTTACATTCAGAGGCTTTGGCTAACAAAGAACAGGAACTAAGTGCCCAGATCAAACAAGCCGTGGAGCAGTGTCGTGAGGAATTGTTGCAGTCGGCACAGGAAAAAGAGCAGCAGGCATCTCTCGCTCTGGAGGAGGCCGAGCTACAGAAAGCTGCAGTTCAGTCTGAGGGGGAGAACAAAGCCAAGGAACTACAGCTAGAGTTGGAGTCGGCCAGAACGaaaattcaAGAACTTGAGAGTTGTCTAGGTGGCTCGGAGAAGGATTCTGCCAAGTCAGATGAACTCTCTGCGCAACTGGAAGAGCAGAGAAAGAAACATGAAGTTGAAATGGCTGCTCTTGAAGAGACACATAAGCAAGAGCTAGAAAAGACGAAGACGGAGCAGATAATGGCCCTCAGTCAGCAGCATGATGCTGCTTTGGAGGAGCTTGTGCAGAAACATGAAGCAGAAATCAAATCTATACTGAAAGACAAGGAGGAACAGTTCCATTGTCATGTGGAAGATATGAACAATAAGATGCTTGATAAACTGAGTGACAAGCAAAACGAGATTGAGACCTTGTCTTCTGAGCTTAGTGAGATACTGAGTAGTAAACAACAGTTAGAAGAAAGACTGTCCGCTGTGGAGACCACTGGTGAAACTGCAAGACAAGAGTTTGAGGAAAGACTCAAGGAAGAACAAGTAAAATATCAGGCTGATATTGAAGCCACAAAACTGAATGAACAGTCATTTGCAGGGATGGAGAAAATGCTGAAAGAAGAGATAAATCAGTTGAAGATTGTGTTGGAGGGAAAGGAAAAAGCACTAGAGGAACATGTGCTTCGAGAAAAGACTTTGCAAGAAGGATGTGTGCAGTTGGAGGAGCTTCGACTCAGAGAACAGTCAAATAAAGAGGCCCTTGATGAATCAAGATCTCAGATTAGCACACTTACCGAAGAGCTCCAGCAAACCAAGAATCAAGTGAAAGATCTTGAGCAAACCCTTGAGGCAGTGCGTAATGATAGTCGGGAGAAAGAAGTGTGTCTTGAACAAAAGACAGGTGAACTTCAGGAACTTGTGCAGACGTTGGAGCAATGCAAGAGGGAActgtctgaaaaagaaaattggCATGCTGCAACCTGCGATACAATGAAAGAGGATCAAAACCGGTTAAGGAAGCAGCTGGAAGACCAGAAGAGTTCTCACGAGAAGAAAATTGAGAACATTAGGAAAGACATGGATTGCAAGCTGAAATCCCAGGAAAACAAGATGGAGAAATTTAAGCAGAAAGCCAAAGAAGTGCAGGACAAGTTGAAGAAGCAGCTTCAGGATCAAGAGGAGAATGCCAAAGTGGAGATATCCAAGAAAGCTCAAGAGATAGATCTGAAAGACCAGCAACTGAAAGAGAAGATCCTTGAGATGGCACATGCAAGCTCTGAGGGTCTCAGCACCGCAATGTCTGATTTGGAGGCCAATCACAAAGAGCACTTAGACAAGCTTCAGGTGACTCATAAACAGGAGCAGGAAGATCTTATTTCTCGCTGGCAGGAGAAACTAAACCAAAATGAGGAGGAGTTGCAAGAGAAACATGCTCAGTCTTTGCAAGAAAAAGCCCAAGAGTTGGAGGAGATCTCTCAGCTGCTTTCGTCCAGCAGGGAAGAAAAGGAACAGGTTGTAAAAGACATCCAGAACCTCAGGGAGGAGCTTGCCATGAGGGAAACCACCGTGCAAAAACTACAGACAGAGCTCAGGGAGGCTGCAAGCAAGCTTGAAAGTTTATCTGAAGGGGAGGGTTTACTTAAAAGACAAGCTGAAACCATGGAGAAGAATCTGAACCAGGCCTTGAATGAAAGAAACCTTTTGCAAGACGAGCTGAGAAAGGCGGAGGAAATTAACAAGGAGAAATTGCAGAGCATATCTGAAGAGTTGGTACACACCCAGGAAAAGTTGAATATGCTTGAAACATCCAAGTGTAAAGAGGGGAAAGATCTCCAGAAAACACTTGAGGAGAAAATTGCTGAActccaaaataaagaaaaagagttCCAGGCACATTTGTGTGCCATCACAAAGGAATTTGAGCAGTGTTGTCAAGAAGCCCAGGCTAAATTAGATGGCTTCTCTGTTGACCTGTGTAAGAAAGTTGAGGAACGTGTTGGGGAGCTACAGCGCCGGGTCATAGATCATCAGAATAAGGTCACATATCTACGGAATATTATCACGATGAAGGACAACAGAATTAGCACTTTAGAGAAAGAACTTCAGCAGACTTTGGATGAGAACCATAATCTAAAGAGCTCTCTTGATGAAGTGAGACTTCAGTTAAATTCAAGTTCAGAGACTCTTAAAGCCTTTCAAACCGAAAGGGACTCTCTGCAGATCGATGCAGATAATCGCTTCCAGGTACTTTCTGAGAAAGACCTTCAAATCCAGCAGCTCTGTGAGGAAAAAGAACACATATCAGAAAATCTCAAAGCAAATGTTTTGCAACTCGGCAATCTAGAAGCTGTCGTAAATGACTTGAAGACCCAGTTAGCAAGTAGCATAACTGAGAAAGAACAAGCCATATCTCTGCTGAATCAGCAGCACAGTGAGGACAAGGAAAAGGTAACATGCCAAATGGGGGAGACGGTGGAAAGGCTAGAAAAAGAGAAGACCGCGCTTCAAGAGCAGGTAGACTCACTCAGGAATAAATTCTCTGAGCTGAAAAAGAAGTTCAGTCAGAGTCACAGCACTGTTAAGTCTCTTCAAGATAAAGTTGCAGACCTGGAGAGGCAGATTTCAGAAAAGGACGAACAACTTCAAACGCTCACTGTCAGCGTTGACAATCACTCCATTACCAAGTCCGAGATGGACCAGGCTCTTAGTGAGAAAGAACAGAGGGTTCATGCCTTGACCTCAGAGCTGGAAAGCTGTTTGAAAAAAGCTTGTGATCTGGAGGAGCAGCTGGAGCTGAGGACAAAAGAGCGAGAACAACTCTCAGCTGATTTGCAGCAGCACCTTACCATTAGAGAGAATGAAAAGTTGGAGTTAATGAAGCAGGTGCAGGAAGCTCAGGACCAAAGCTCCCAAAACGGTGCCCTTATCCAGAAAACTGAGGAAAGTCTTCAGTCTTTGAGGAAAGATGTTGAAACAGCCGAGCAGGAACTGGAATCCCAGCGGAAAGAGTTTGAGAGGGAGAAGGCTGAGATCCTGAGCGCGAATGAAGAGGTTGTGAAGGCAGTCCAAGAAAAGGCGTCTGCCGAAACAACTGGTAAAGTAGCGGAGTTGAAGAAGAAGGCAGAGCAAAAGATTGGCATGATTCGCAAGCAGTTGACGTCACAAATTGAGGAAAAGGAACAGGCTATCAAAGACTTGCAGACGCTGTTGGAAAGCATCAAGCATACCCAGAATGAAAAAGAAGAACGTATAAGTTCTCTAGAGGAAATTGGGAGGACAATGGAGGAGGCCACTGCAAAATTAAAGGAAGAGCATGCAAGACGTCTACAAGAATTGcagcagaaagaaaatgagGACAGACAGGCCTTAAAAGATGTGTATGAAGAGAAGCTTGCTGCTCTTCATAAAGACGTGTCTGCAAAAGAGGAGCAATCTGCTACTGCTGCTATAGAAACGTCTTCTAGACTTGGAGAGCTTGATGCCAAACTCTCAGAATCTAATGAGCAGATTGCAAACTACCAAACCGAGGTAAGTCGCCTTAAAGCAGACCTGCTTGAACAGACCACTCGGGTGCAGGAGCTTCAGCAGACATGCTTGGATCTTCAAGAACAGATTAAAGAGAAACAGACTGATGAAGTTGAGAAGGAACATGTTTTTGTGCAAATGTCCAGCACTACATTAGGAATGGAGCCTGCGATGTTAGTGGGCAAGGAGAACATGGACACTATCAGCAACCGAGATGATTGGACAAGTCAGAAGGACTTGTTGGTGAAGGAATATGAGGAGAAACTCCAAGATTTGCAGCAGAGGTTACAAGAGAAGGAAAATGAGCTAAAAGCACAACAGAGTTCACCTCAAGGAAATGGGGAGACCGTTAACGAGTGCCTAATCAACAATACAAACACCTCAGAGAATGATCTTCAGAGAAAGCTGATAGAGGCTGAGAACGAGAAGCAGAAGCTCCACAAAGACTACACCAGGCTACAAAAAGACCTGCGGTCTCTGAGGAAAGAGCATGAGAAGGAGCTGGAATTCCTGAAAAAGGAAATGTCTGAAGAAACCGAGAAGAAGCTGAAgcttgAAATGGAAGATATGGAAATGAAACACAATTCTGCTCTTAAGCAGTTGATGAGGGAGTTTAATACTCAGATGGCCCTAAAAGAAAAGGAACTGGAAGGTTCAGTGAAGGAAACCATTGAGAAAGCTCAGGGTGTCGAAGCCGAGCTTATAACTAGCCATCGAGAAGAAGTCAGTCAACTTCAGAAAACAATCTCTCAGAAGGAAGAAGACttaaacaaaacagttcagcGCTACGAACACGTCCTTCAGAGTCGTGAGGTGGAGATGGGCGATCGCGTGTGGGAGGTGCAGAAGGAGTTAGAGGAGCTTCAGCAGAGGAGTCTCAGCGGCCCTCAGggtCTTGAAGAGTTAAAGGTGCAGCTTGCAGAAAAGACGACCATGTTGAGCGAGCTCAGGCTAAAAGAGCAGGAATACCACAACAGAattcACGCACTAGAAGACAAACTAAGGCGCTCCCATAAAAACGCAGTGGTGACTCACCTGGGAAGCTCATATAGAGatttgTCACACAACAGCGTGGACCCCTTCAGCGAGCCGACCGAATTCGAGTACCTCAGGAAGGTCATGTTCGAGTACATGATGGGAAGAGAGACAAAGACAATGGCCAAAGTCATAACCTCCATGCTGAAGTTTCCTGCGGACCAGGCGCAGAAGGTTCTGGAGCGTGAGGATTCCCGTGTGATGCCCTGGCTccggtgagagagagagagagagagagagagagaaccagaACCGTGCCTGAACCAACCACAGATTCTCCTGCTGCTGCTTAGAGACGATGCTACTGACGAGAAAGAGTCTgcttatctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgcgtgcgtgtgtgtgcgtgtgtgtgcgtgtgcgtgcgtgtgcgtgcgtgcgtgcgtgcgtgcgtgtgtgtacacGGTTACTGGTACAAGGGAACTTGGTTAGATTAagaaattgaaagaaaatataaagaaCGTTCTTAAATTTGTAGCTCGCcagaaataatttattacacgttttttttcttgctttctctttttcatttttttttttttagggtagacggtttttttttttttgtttaaagctgCGTTTGTATGATTTCCAGATTTGTGCAATATGTTTGATTGTAAGTTTCAGTTTGGCTGATTCTCTATTTTTCCCGGATTATTTCATGTTGTATTCctgttttttctctgttttaagGTAAGATGGAATCCCCTTTAACTATCCGCTCAGCACATGTACGATATAAAGACGCGGGCTCGTAGTAAGCTGGTTGTTTACTCTGTTTATGTTGGTTTTTGTATCTTAATACTGTATTTTCGGGGGAAACTGACTAATTAGAACCATGCTTCGTATTGTAAATAATCATTGTTGGAAAAAAGGCTATAAATCTCTGTCATAGGGCACTTTGAGGcggttaatacattttaagacgactaataaagttttatttacacta

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU140608 lncRNA downstream 76148 19286037 ~ 19287424 (-) False itga9
TU140529 lncRNA downstream 155303 19201843 ~ 19208269 (-) True G94997
TU140501 lncRNA downstream 193483 19169868 ~ 19170089 (-) True G94978
TU140483 lncRNA downstream 284733 19078560 ~ 19078839 (-) True G94961
TU140438 lncRNA downstream 388073 18957718 ~ 18975499 (-) False LOC122357020
TU140625 lncRNA upstream 25673 19425563 ~ 19427926 (-) True G95068
TU140683 lncRNA upstream 191982 19591872 ~ 19593376 (-) True G95110
TU140737 lncRNA upstream 269819 19669709 ~ 19670331 (-) True G95147
XR_006252305.1 lncRNA upstream 418163 19818053 ~ 19835653 (-) True LOC122356282
TU140781 lncRNA upstream 446411 19846301 ~ 19846534 (-) True G95190
XM_043255441.1 mRNA downstream 1531 19286030 ~ 19362041 (-) True itga9
XM_043256180.1 mRNA downstream 97063 19258386 ~ 19266509 (-) False LOC122357009
XM_043256181.1 mRNA downstream 97586 19258386 ~ 19265986 (-) True LOC122357009
XM_043256196.1 mRNA downstream 115994 19245604 ~ 19247578 (-) True zmp:0000001138
XM_043256191.1 mRNA downstream 118725 19222056 ~ 19244847 (-) False LOC122357016
XM_043254703.1 mRNA upstream 29946 19429836 ~ 19460397 (-) False kcnk12
XM_043254702.1 mRNA upstream 29946 19429836 ~ 19460397 (-) True kcnk12
XM_043254966.1 mRNA upstream 105972 19505862 ~ 19532003 (-) False fbxo11a
XM_043254965.1 mRNA upstream 105972 19505862 ~ 19532003 (-) True fbxo11a
XM_043256074.1 mRNA upstream 280355 19680245 ~ 19685333 (-) True ntpcr
TU140311 other downstream 690679 18545581 ~ 18672893 (-) True LOC122356088
TU140313 other downstream 690679 18545581 ~ 18672893 (-) False LOC122356088
TU140314 other downstream 690679 18545581 ~ 18672893 (-) False LOC122356088
unassigned_transcript_1930 other downstream 1643866 17719634 ~ 17719706 (-) True trnav-aac_26
unassigned_transcript_1929 other downstream 1644393 17719107 ~ 17719179 (-) True trnav-cac_10
XR_006252356.1 other upstream 468123 19868013 ~ 19907062 (-) False disc1
XR_006252430.1 other upstream 743706 20143596 ~ 20143727 (-) True LOC122357145
TU141250 other upstream 1080035 20479925 ~ 20486704 (-) True G95520
TU141252 other upstream 1081553 20481443 ~ 20486704 (-) False G95520
TU141235 other upstream 1088895 20488785 ~ 20492076 (-) True G95510

Expression Profile