RNA id: XM_043256412.1


Basic Information

Item Value
RNA id XM_043256412.1
length 1977
RNA type mRNA
GC content 0.42
exon number 5
gene id agt
representative True

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 8779155 ~ 8782768 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CTGGTTTGAAGCTGAATATTGGGAAAATCTGTGTCTCAATACTGTGTTAATGTATAACTAAGTGGACTGGTCATCGTGCAgtatatgttatttaaatactgGGTAGACCCTCAGTCCACCACAGTCCAGCTCTAGAATCAGCAAAGCATCTGAAGGCACACCGGAAGAGCTTCCCATTAAGATGAACAAGATGTTCTTCACCCTCTTAATGGTTTCCTGCTTTGCGATAGGAACAGCCAATCGTGTGTATGTCCACCCCTTCAACCTATTTAGCTCTGACAACATCAGCTGTGAGGTTATCCAGAATGAGGAACGCAAGCCCGTTGAGACGGTGCATCCACTGACTCCTCTTCAGGACAGCACTGAGCCGGACCCACGATCCGGAAGCACCACAGAGAACCTGAAAAACCTCACCCAGCGGACCGCTGTGTTAGCAGAACTGCAGAATTCACTTGGGCTGCGCATGTACCAGTCACTTAGTCGTACACAGAAGCATGCCAACACGCTGCTGTCACCCCTAAATGCCTTTGGGGCTTTGGTGACCCTCTACCTGGGAGCATCCAAAAAGACTGCCGTTTCCTACCAACAGCTGTTAGGACTCAACCTGGAGTCTAAGCAGGCCGACTGTGCGTACTTCATTGATGGACACACGGTGTTGCGTACGCTCCAGGCCATCAGTGCACAGGCAGAACAATCGCAAAATGAGCTCAGGACCCTCGTGTGGACCTTCATTAACAGCGACGCAGACCTTTCCAAAGACTTTTTACGTGGGACACAAGATTTCTCTGATGACTCTTTTGTCCGAGCTGTGGACTTCTCTAACGCGAAGGAAGCTGAGGTGCAGGTGAACAACTTTATTCAGAAAACGTCAGACAGCAAGGTTAAGGACCTGTTTAAGGATGTTACTCCAAAAACAGATCTGCTGTTTGCTAGTTCAGTGCATTTTAAAGGTAATTGGAAAATTGCTTTCCAAGCTGAAGCAATCAGTGATCAAAAGTTCTGGACCCATGAGAACTCAACTGTTGAAGTCCCCTTCATGATGCACACTGGAAACTACATGTACTTCAATGATGTTGGCAGGAAGTGCTCTATAGTCAAGCTTGGTCTCGGGGAAAGGACCTATCTGCTGCTAGCGCTGCCTCATGAGGGAGCTAGCCTGGAGGACATTGAGAAGCAGCTCCCAACAATCATACCTGCATGGCATCAAAATCTAAAAGAAATAAATCTGGAACTATCTTTGCCCAAATTCTCCTTGACCGCTGTGACAGACCTGAGATTGGTTTTATCAGAAATGGCAGTAGAAAAATACCTCTTGGGCTCCGATGCCAACTTCAGAAGACTGAGCAGCAAGGAGAACTTCACCGTTGATAAGGTCCTCAACAAGGTTGTTTTTGAGATGACCGGAGGTTCAGAGGTTCAGAACAGAACTGAAGATGAACCGGTTCCCCATAAAGTTAGGATCAACCGGCCCTTCTTCTTTGCTATTGTAGAGGGCAACTCTAATGCCATACTCATGCTAGGCAAAATCGTCAAtccaaaaacttaaaaatttgttATGGTGGTGACCttacattatattacaatataaacagTGTTTTAGAGTTTCCATCCAACTAACAACTATATGTTAAAACAATGGATAACGTCAAGTCAACCAGATATATCTTTGCAAcctttttacagatttttaggacttgtatgttttatattttagtatctgctaattcaaaatgtttaatatagaGTTTGTTTCTATTCATAACATGGTTACttgaattaattgcaattatttcagcatttagtATTCATAATAAGGAATACACAAACTCCATTTATGTActgttaaaagaaattaaatttgaatatttatgaataaatatgacgtgGAGGGGTGCTCGtttttatcttaaattgtaaaatgattaaataagaATGTAAGAAACCAGAAAGATTGTAAATAAAAGCAACTGTACAGTA

Function

GO:

id name namespace
GO:0003081 regulation of systemic arterial blood pressure by renin-angiotensin biological_process
GO:0030162 regulation of proteolysis biological_process
GO:0010951 negative regulation of endopeptidase activity biological_process
GO:0005615 extracellular space cellular_component
GO:0004867 serine-type endopeptidase inhibitor activity molecular_function

KEGG:

id description
K09821 AGT, SERPINA8; angiotensinogen

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU136267 lncRNA upstream 21308 8754719 ~ 8757847 (+) True G92036
TU136265 lncRNA upstream 25271 8752467 ~ 8753884 (+) True G92034
TU136213 lncRNA upstream 186501 8591208 ~ 8592654 (+) True G91995
TU136208 lncRNA upstream 193152 8585357 ~ 8586003 (+) True G91991
TU136134 lncRNA upstream 297163 8479443 ~ 8481992 (+) True G91944
TU136276 lncRNA downstream 240 8783008 ~ 8783630 (+) True G92042
TU136282 lncRNA downstream 3827 8786595 ~ 8786864 (+) True G92045
TU136283 lncRNA downstream 4220 8786988 ~ 8787849 (+) True G92046
TU136284 lncRNA downstream 6229 8788997 ~ 8789201 (+) True G92047
TU136285 lncRNA downstream 6963 8789731 ~ 8791052 (+) True G92048
XM_043255697.1 mRNA upstream 39060 8739036 ~ 8740095 (+) True sf3b5
XM_043254598.1 mRNA upstream 44197 8721028 ~ 8734958 (+) False oprm1
XM_043254597.1 mRNA upstream 44201 8721035 ~ 8734954 (+) True oprm1
XM_043255625.1 mRNA upstream 96103 8666267 ~ 8683052 (+) False pcnx2
XM_043255624.1 mRNA upstream 96103 8666268 ~ 8683052 (+) True pcnx2
XM_043254821.1 mRNA downstream 8388 8791156 ~ 8807527 (+) True pgbd5
XM_043254958.1 mRNA downstream 110225 8892993 ~ 8900282 (+) True abcb10
XM_043254970.1 mRNA downstream 118782 8901550 ~ 8905011 (+) True acta1b
XM_043254971.1 mRNA downstream 123118 8905886 ~ 8909793 (+) True ccsapb
XM_043256099.1 mRNA downstream 157960 8940728 ~ 8942899 (+) True pdcd2
TU136262 other upstream 39066 8739073 ~ 8740089 (+) False sf3b5
XR_006252358.1 other upstream 96103 8666268 ~ 8683052 (+) False pcnx2
TU135961 other upstream 468331 8306486 ~ 8310824 (+) True G91833
XR_006252298.1 other upstream 897672 7858698 ~ 7881483 (+) False zswim8
TU135767 other upstream 940214 7836190 ~ 7838941 (+) False chchd1
TU136388 other downstream 378793 9161561 ~ 9164114 (+) True zgc:153981
TU136946 other downstream 1453148 10235916 ~ 10249725 (+) False LOC122356813
XR_006252428.1 other downstream 1546376 10329144 ~ 10329279 (+) True LOC122357143
XR_006252423.1 other downstream 1636054 10418822 ~ 10419594 (+) False ly6pge
TU137252 other downstream 2182105 10964873 ~ 10968914 (+) True eif4ebp2

Expression Profile