RNA id: TU152377



Basic Information


Item Value
RNA id TU152377
length 769
RNA type TUCP
GC content 0.58
exon number 2
gene id G103094
representative True

Chromosome Information


Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 1777020 ~ 1828300 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TAAACGTTACCCGCGTGAGTTTATCACGCATCTAATTATTCGAACGAGTTTGGAACCCTAGAGTTCTAATTCCGAACGCGCCGCGCGAACACGTGTTCGCCGGCGACACGGGGACTCACCTTATCAAGTCTAAAAACGAGTCGATGACTTCTTTGGCTTTTGGGACCTCGGTGTCATCCTGGTTGAGGCTGGACATTTTTTGTCCGCTGGAGCCGGGCTGTATGATGAACGCCATAATAACGCCGATGGCGGACGCGATCAGAGTGGTCACCAGAAAGAAGAGCATCGCCCACCCGCCCAGCTTGCCCAGGGCTTTGGGGTCAAGGCTGGCGGCCCCTGACACCAGACTGCAGACCACCAGGGGAATGATGATCATCTtgagcaggcggatgaggagcTCGCCGGGGAACCCGAAGTAAAGGATCTGCGTGCGGCTCAGCCCGGCGCTTCGCACGCCGAGCCCGATGAAGACGCCGACGATGACCGCGGACACCGTCAGGATGACCAGCAGGTTGGCCATGGCGAAGCGCTTCAGTTTCTGCCCTCTGGTCTCCGGCTCGCTCCTCGCGCGCTCGCCCAAGCCGTTGGCGATGGCCGGGTCGTCCAGGTGCGCTTCGCCGTTGGACGCCTTTGCGTCTTCTATAGAGATCTTTTCTTCTGCCATCGTGCCCGTCTGAAGGTGGGAGAGTTCGTGTAAAAGTCTTTGGTGCGAGCTGATCGTccgctctctctctctctctctctctctctctctctctctctctctctg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU152405 lncRNA downstream 32547 1741721 ~ 1744473 (-) True G103114
TU152336 lncRNA downstream 150287 1622684 ~ 1626733 (-) True G103080
TU152240 lncRNA downstream 291786 1481657 ~ 1485234 (-) True G103003
TU152232 lncRNA downstream 372160 1348194 ~ 1404860 (-) True G103000
TU152193 lncRNA downstream 486880 1289464 ~ 1290140 (-) True G102970
TU152432 lncRNA upstream 53585 1843412 ~ 1844995 (-) True G103129
TU152446 lncRNA upstream 78028 1867855 ~ 1870349 (-) True G103140
TU152454 lncRNA upstream 233415 2023242 ~ 2029167 (-) True G103147
TU152469 lncRNA upstream 290245 2080072 ~ 2083216 (-) False LOC122359217
XR_006252692.1 lncRNA upstream 290256 2080083 ~ 2083265 (-) True LOC122359217
XM_043259842.1 mRNA downstream 8949 1767053 ~ 1768071 (-) True LOC122359511
XM_043259344.1 mRNA downstream 198883 1382872 ~ 1578137 (-) False cadm2b
XM_043259340.1 mRNA downstream 198888 1382872 ~ 1578132 (-) True cadm2b
XM_043259346.1 mRNA downstream 198888 1391803 ~ 1578132 (-) False cadm2b
XM_043259345.1 mRNA downstream 198902 1382872 ~ 1578118 (-) False cadm2b
XM_043258363.1 mRNA upstream 12161 1801988 ~ 1807484 (-) False LOC122358522
XM_043258362.1 mRNA upstream 12161 1801988 ~ 1806971 (-) True LOC122358522
XM_043258353.1 mRNA upstream 88388 1878215 ~ 1882508 (-) True si:dkey-202l22.3
XM_043259659.1 mRNA upstream 99856 1889683 ~ 1896275 (-) True si:dkey-202l22.6
XM_043259487.1 mRNA upstream 117027 1906854 ~ 2013874 (-) True LOC122359198
TU151874 other downstream 1675086 98628 ~ 101934 (-) False LOC122359153
TU152433 other upstream 55172 1844999 ~ 1845494 (-) True G103130
XR_006252662.1 other upstream 348740 2138567 ~ 2156930 (-) True scn2b
TU152493 other upstream 417520 2207347 ~ 2291926 (-) True G103183
TU152527 other upstream 884247 2674074 ~ 2675712 (-) False LOC122359207
TU152529 other upstream 884247 2674074 ~ 2675825 (-) False LOC122359207

Expression Profile