RNA id: XM_043260811.1


Basic Information

Item Value
RNA id XM_043260811.1
length 2533
RNA type mRNA
GC content 0.41
exon number 7
gene id ebag9
representative True

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 21983890 ~ 21989916 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CACAGACTCCAGTTCCCTGTTGGTGTGAGGTGATACAATGAAGGGACGATGGCTGCTTGCATCAGACTAATATGGATGAGAATGACCACCTTGACAGCCGCTATTCATGATGGTTCTGCTTTCCTGAACGCTGTCTTTGCCAAAACACACTAATTTCCCTGTTTCGTCCCATCTGTAAAGGCCAAGTGTTGTATTTGCCTCAGTCTGCTAGCCCCGTGCTATGATTCTATCCACATCAACTCTCTTTAATTGACCTGACCGATATCACTCATAACATGGCCATCACACAGTTTcgcctttttaaaatatgcaccTGCTTGGCGTCTGTTCTCTCATTCTTGAAAAGACTGATTTGCAGGACTGGAAGGTCACGCAAGCTGAGTGGAGATCAGATCACCCTCCCAACCACTGTTGACTATTCCTCTGCACCAAAACAGCCAGAGATCGAGGAGTGGAGCTCGTGGGATGAGGAAGCTCCAACAAGTATTAAAATTGAGGGTGGTAACGGGATAGTTCCACCTCCACAGAATGAAGCTGAAGAAGAAGAGCCAGACTACTTCAAAGACATGGCACCCACCATCAGGAAAACACAGAAAATTGTCTTGAAGAAAAGGGAACCTCTGAATTTCTCTATGCCAGACAGCTCCTCAGGTTTCTCCAGCCGACTAGCCGCCACTCAGGACATGTCCTTCATCCAGCCCTCTGCGGAGCTGGGGGACCTGGACACCTGGCAGGAGGACACCAACGCCTgggaggatgaggaagatgCAGCTTGGGAGGCAGAGGAAGTGCTGAGGCAGCAGAAGCTGGCTGAGCGAGAGAGACGTGCAATGGAGCaacagaggaagaaaatggaaaaagagGCCCAGAGAATGATGAAAAAAGAGCAGAAGATTGCTGTCAAGCTTTCATAACATTAATACAGCGGACACTCAAAGCAACAGCCAAACAACtgaacatattacattttaccttGTTTCATCAACACTGCTGTCTTCACCTTTatgggatatttttttttggtccatcATCCATCTTGGggaatttttgtttgtttgtttcttcagtttttgttttttttttattggactGAACAGAGCACAAAGAATCGTcccttttgtttatttttgagttaTTGTGACATTTCTTACCATGCTCtcgatgaaagaaaaaaaccaaatgttttttttctgtcagtatTTATAACACTTGAGTGATTTTGTCAAGAAAAATTTTagataaggatttttttttgtcttccatttgtttttcttcatcattTTCTCCTGTGCTTTAAACACTGGACCTCACCAGAAATTAGTGATATCTCAATATTTCAAAAGAATCAAATTCATGCAACCTTGGGTTTTTGCTCTACTCATTCTATTTAGCCGTCTATCTAATCTGTTGTCATTCTGTTTACCTGATAATTAGGGGCTTAATTGTGAATAACTCTTATATATTGATCTTGATTTTTCTAAAGACAACAATTTGAGTCATCTGGTTAAGGAATTAGTAATTATCAGTGGGAATAGAGAGCAGAAATATTCAGTATGTACCGAGGCTCCAAGAGAGCTCTTTCAAGAGGTGTGGGTTGGTCGTCATGGAAACGCtgaaattgttaaaatatcCAAATTGGCAACCAAACCATCTTTTATCTATAGTAATACTGTGTTACTGAGAAGAGCATTGACTAAGAGAAAAGAATTcaccatttaaaagtaatttcacCAGAGGAACGGCTTGTGTTTAGCTATTAAAGTGTTTCTTATCGCTTGAAAATATAGAAATTGATCATGTTTACTGATAGGATGATGGTGGTGCTGAAATTAACTTCTGCATGCTATGATGAATATTAAGGAACATGAAGCCATGAGAGCCACAGGCACAGATAACaatgaaaaactgaataaaatctatttttattttgctatgaTTTATGTTTCCCACTCATGCATGCTCAtgctttttttaagttgtttttccACAGTGCAGCCTCAGCTGTAATAAACATTTCGGTTGTCTGTTCAGTGGTTTACTTTTATTAAGAGGCTTTCGGAATCTTCTACTGTCATTTCTTCACCCAAAAAACATGCTCATCGTGCCGTGGTAAAGATGACGTCTTCGGGTCTTTGAACATAATCAGCAATACCAGACTTTATTGGATCTGTTTGTACTCAGACTGTTAAGATGTTCAATCAGCATCATAAAGCTGAATACATGTCATATCATTTGTGATATTCAAGGTCAGACGCGTTGTCCGGACCGGTGGAATATTCCAGCTCTGAGAACATGATGTCATAATCCCCATCTGCCTCAGCAACGCCCTCGGTCGACCAACCCTCCCACAGCCTGACCCACTTAGACAGAAATAGAGGAAAATAAACTCTGACTGAATTATACATTACGTGCTGTCTTCTGCAGCTGTGCGCATCATCATAATCACACCTGACTTTATGGTTTTCACTCGGGTTTGTCTCTGTAATCATCAAGGTTTTTGGACCatgttcattaaataaaatgtatataaaca

Function

GO: NA

KEGG:

id description
K22455 EBAG9; estrogen receptor-binding fragment-associated gene 9 protein

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU170026 lncRNA upstream 154359 21828216 ~ 21829531 (+) True G115157
TU170003 lncRNA upstream 289346 21693494 ~ 21694544 (+) True G115134
TU169926 lncRNA upstream 592728 21390781 ~ 21391162 (+) True G115074
TU169826 lncRNA upstream 814537 21167994 ~ 21169353 (+) True G115020
TU169778 lncRNA upstream 841860 21141042 ~ 21142030 (+) True G114983
TU170090 lncRNA downstream 7094 21997010 ~ 22001617 (+) True G115200
TU170216 lncRNA downstream 537241 22527157 ~ 22530262 (+) True G115288
TU170288 lncRNA downstream 777585 22767501 ~ 22768460 (+) True G115342
TU170376 lncRNA downstream 993145 22983061 ~ 22983700 (+) True G115401
XR_006252753.1 lncRNA downstream 1009533 22999449 ~ 23003110 (+) True LOC122359996
XM_043260812.1 mRNA upstream 11390 21971222 ~ 21972500 (+) True tmem42a
XM_043261480.1 mRNA upstream 15343 21962220 ~ 21968547 (+) True gpd1l
XM_043261107.1 mRNA upstream 62359 21883909 ~ 21921531 (+) True stt3b
XM_043261176.1 mRNA upstream 110918 21849989 ~ 21872972 (+) True tgfbr2b
XM_043260599.1 mRNA upstream 161417 21703738 ~ 21822473 (+) False rbms3
XM_043260213.1 mRNA downstream 14319 22004235 ~ 22010159 (+) True gdf6a
XM_043260421.1 mRNA downstream 146652 22136568 ~ 22139827 (+) True LOC122360094
XM_043261628.1 mRNA downstream 230958 22220874 ~ 22258766 (+) True eif3ea
XM_043260352.1 mRNA downstream 271385 22261301 ~ 22313025 (+) True rspo2
XM_043261393.1 mRNA downstream 563847 22553763 ~ 22639975 (+) True adgrb1a
TU170081 other upstream 4522 21977117 ~ 21979368 (+) True G115193
TU170042 other upstream 89358 21883929 ~ 21894532 (+) False stt3b
XR_006252812.1 other upstream 110918 21849989 ~ 21872972 (+) False tgfbr2b
unassigned_transcript_2160 other upstream 844938 21138881 ~ 21138952 (+) True trnae-cuc_37
XR_006252832.1 other upstream 1756813 20219644 ~ 20227077 (+) False hjv
TU170321 other downstream 919645 22909561 ~ 22911076 (+) False LOC122359863
TU170371 other downstream 974653 22964569 ~ 22970526 (+) False LOC122360067
TU170363 other downstream 1120367 23110283 ~ 23112166 (+) False LOC122360203
XR_006252766.1 other downstream 1174650 23164566 ~ 23166279 (+) False wnt4b
XR_006252835.1 other downstream 1232141 23222057 ~ 23223731 (+) False rps9

Expression Profile