RNA id: TU186589


Basic Information

Item Value
RNA id TU186589
length 479
RNA type TUCP
GC content 0.58
exon number 1
gene id LOC122322993
representative False

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 14906616 ~ 14910157 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CTGGTGGCCTCGCTGCACGTTCGGTGTCCGGCCGGCCTGAGCGCAGAGCGGTGCGCGGATCTGATGGCAAGGATCACGGCCGTGCTGAACGCTTTCGGCGTCGAGCGCTGCACCGTGCAGCCGGAGTTCGTCCGGAGCGGAGTGGCGGCCCGGGGCGGCTCGGCCTGCAGCTTGAGCTGTGGGCAGGAGTGTGCGGGGAAGCTCTGCTGCTCGCCTCAGCTGGAAGAAACCAGCTGTCCTGAGAGTCCTGTTCGCGTCCAGGACGAGGGATCCTGCTCTCCAGCGCCGCACAGCGCCGATCAGATGAAAGATGTGGTTATTGAGAACACGTACTTGTGATGATTAAAGGGTCGTCATATTCCAATCTATTCGGCTGATCTCAGGTTCTGGaggtagcacttttagcgtagcttagcatagatcattcaatctgattagaccgttagcatctctCGCTCAAAAGAGAGTTTCAGTATTTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006246940.1 lncRNA upstream 165754 14740786 ~ 14743444 (+) True LOC122323060
TU186500 lncRNA upstream 438183 14470760 ~ 14471015 (+) True G126285
TU186468 lncRNA upstream 466695 14375565 ~ 14442503 (+) True G126262
TU186455 lncRNA upstream 788348 14120193 ~ 14120850 (+) True G126251
TU186447 lncRNA upstream 840327 14068604 ~ 14068871 (+) True G126243
TU186590 lncRNA downstream 153 14909829 ~ 14910157 (+) False LOC122322993
TU186586 lncRNA downstream 22645 14932321 ~ 14984748 (+) True G126347
TU186584 lncRNA downstream 27249 14936925 ~ 14937634 (+) True G126345
TU186722 lncRNA downstream 125707 15035383 ~ 15047877 (+) False LOC122362588
TU186725 lncRNA downstream 156670 15066346 ~ 15066577 (+) True G126458
XM_043264627.1 mRNA upstream 7791 14871768 ~ 14901407 (+) True ppp1r37
XM_043216812.1 mRNA upstream 58822 14843211 ~ 14850376 (+) True bmp16
XM_043264096.1 mRNA upstream 81520 14826788 ~ 14827678 (+) False gemin7
XM_043264097.1 mRNA upstream 81520 14826865 ~ 14827678 (+) False gemin7
XM_043263957.1 mRNA upstream 133805 14752182 ~ 14775393 (+) True kcnj5
XM_043264968.1 mRNA downstream 1368 14911044 ~ 14921023 (+) True shkbp1
XM_043264969.1 mRNA downstream 1471 14911147 ~ 14921023 (+) False shkbp1
XM_043264122.1 mRNA downstream 125713 15035389 ~ 15047893 (+) True LOC122362588
XM_043264103.1 mRNA downstream 142368 15052044 ~ 15064838 (+) True si:ch211-136a13.1
XM_043216733.1 mRNA downstream 157186 15066862 ~ 15072223 (+) True yif1b
TU186588 other upstream 715 14907267 ~ 14908483 (+) False LOC122322993
TU186575 other upstream 80906 14826881 ~ 14828292 (+) True gemin7
TU186297 other upstream 967829 13940095 ~ 13941369 (+) True G126146
TU186336 other upstream 996398 13909564 ~ 13912800 (+) True G126175
TU186277 other upstream 1226627 13679045 ~ 13682571 (+) True G126132
TU186953 other downstream 1042343 15952019 ~ 15953653 (+) False LOC122362954
TU187042 other downstream 1143202 16052878 ~ 16055627 (+) False LOC122362745
TU187043 other downstream 1143453 16053129 ~ 16055627 (+) False LOC122362745
TU187112 other downstream 1355082 16264758 ~ 16271267 (+) False LOC122362750
TU187265 other downstream 1908055 16817731 ~ 16818399 (+) False G126820

Expression Profile