RNA id: TU187112



Basic Information


Item Value
RNA id TU187112
length 300
RNA type TUCP
GC content 0.53
exon number 2
gene id LOC122362750
representative False

Chromosome Information


Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 16263839 ~ 16271267 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GCGATCATCAACAGCACCATTACTCCTAATATGACCTTCACGAAGACGTCACAGAAGTTCGGCCAGTGGGCGGACAGCAGGGCCAACACGGTGTATGGCCTCGGGTTCGCCACGGAGCAGCAGCTGCAGCAGTTCTCGGAGCAGTTTAAAGAGTTTAAGGAGGCTGCGCGGCTCATCCGAGACAAATCACAGGAGAAGTTTGAGTTGCTGAGTCCAGGCCTAAACATCTCTTCTCCACAGGTAAACACAGCAACTCGCATTTAACTTCAGCTAAACCTTTCGCGAGCGTGACAGAACGGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU187074 lncRNA upstream 53175 16208584 ~ 16211583 (+) True G126711
XR_006253180.1 lncRNA upstream 205784 16058534 ~ 16058974 (+) True LOC122362955
TU186957 lncRNA upstream 260940 15999452 ~ 16003818 (+) True G126626
TU186927 lncRNA upstream 436405 15825427 ~ 15828353 (+) True G126605
TU186908 lncRNA upstream 444428 15760963 ~ 15820330 (+) True G126591
TU187097 lncRNA downstream 83964 16355231 ~ 16361646 (+) True G126722
TU187095 lncRNA downstream 86203 16357470 ~ 16361646 (+) False G126722
XR_006253168.1 lncRNA downstream 105171 16376438 ~ 16378666 (+) True LOC122362848
TU187126 lncRNA downstream 134188 16405455 ~ 16406624 (+) True G126743
TU187101 lncRNA downstream 182730 16453997 ~ 16494634 (+) True G126723
XM_043216900.1 mRNA upstream 145996 16115991 ~ 16118762 (+) True LOC122323208
XM_043216901.1 mRNA upstream 145996 16115993 ~ 16118762 (+) False LOC122323208
XM_043264308.1 mRNA upstream 148914 16090090 ~ 16115844 (+) True LOC122362747
XM_043264766.1 mRNA upstream 179344 16075471 ~ 16085414 (+) True LOC122362951
XM_043264307.1 mRNA upstream 189334 16063967 ~ 16075424 (+) True LOC122362746
XM_043216848.1 mRNA downstream 58442 16329709 ~ 16334460 (+) True hdgfl3
XM_043216847.1 mRNA downstream 58445 16329712 ~ 16334460 (+) False hdgfl3
XM_043264487.1 mRNA downstream 66778 16338045 ~ 16348905 (+) False homer2
XM_043264488.1 mRNA downstream 67767 16339034 ~ 16348905 (+) True homer2
XM_043264486.1 mRNA downstream 67768 16339035 ~ 16348905 (+) False homer2
TU187042 other upstream 209131 16052878 ~ 16055627 (+) False LOC122362745
TU187043 other upstream 209131 16053129 ~ 16055627 (+) False LOC122362745
TU186953 other upstream 311105 15952019 ~ 15953653 (+) False LOC122362954
TU186589 other upstream 1355082 14909198 ~ 14909676 (+) False LOC122322993
TU186588 other upstream 1356275 14907267 ~ 14908483 (+) False LOC122322993
TU187265 other downstream 546464 16817731 ~ 16818399 (+) False G126820
TU187381 other downstream 802927 17074194 ~ 17077159 (+) True G126884
TU187377 other downstream 858655 17129922 ~ 17164757 (+) False LOC122362575
TU187380 other downstream 858655 17129922 ~ 17164757 (+) False LOC122362575
TU187389 other downstream 1032553 17303820 ~ 17305974 (+) False LOC122322904

Expression Profile