RNA id: TU223398



Basic Information


Item Value
RNA id TU223398
length 270
RNA type TUCP
GC content 0.57
exon number 1
gene id G150946
representative True

Chromosome Information


Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 8921698 ~ 8921967 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GTAATgattgatagacagacagatagaaggaacgaatgaatgaatattagatggatgacagacagacagctgcAGACCTCTAACAGCTCGTCTCCCACTCGGATACGTGTGTCTCTGCTGGCCGGTCCTCCGGCGGTGATCCCCACCACGAAGATGCTCATGCAGGAGCGATCCCTGTTCCCCGCCAGACTGAGTCCCAGGCCGTTCCGGTCCTTCTCCAGCTCCACGATCAGCAGCTCTCCCGGCAGGTCCGCGTACCTCTGCCTGATC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU223396 lncRNA upstream 3033 8918063 ~ 8918665 (+) True G150944
TU223395 lncRNA upstream 11568 8909930 ~ 8910130 (+) True G150943
TU223394 lncRNA upstream 13219 8907397 ~ 8908479 (+) True G150942
TU223390 lncRNA upstream 15955 8903800 ~ 8905743 (+) False G150941
TU223400 lncRNA downstream 9512 8931479 ~ 8932019 (+) True G150948
TU223401 lncRNA downstream 10590 8932557 ~ 8932788 (+) True G150949
TU223403 lncRNA downstream 16436 8938403 ~ 8938776 (+) True G150951
TU223404 lncRNA downstream 22469 8944436 ~ 8946194 (+) True G150952
TU223405 lncRNA downstream 25149 8947116 ~ 8947710 (+) True G150953
XM_043222327.1 mRNA upstream 29499 8890622 ~ 8892199 (+) True pdzk1ip1
XM_043223371.1 mRNA upstream 35270 8880269 ~ 8886428 (+) False tal1
XM_043223444.1 mRNA downstream 74004 8995971 ~ 9004905 (+) True tm2d1
XM_043222439.1 mRNA downstream 276057 9198024 ~ 9223536 (+) True frem1b
XM_043222440.1 mRNA downstream 276082 9198049 ~ 9223536 (+) False frem1b
XM_043222443.1 mRNA downstream 301843 9223810 ~ 9227301 (+) True atpaf1
XM_043222442.1 mRNA downstream 306441 9228408 ~ 9235230 (+) True rab3b
TU223397 other upstream 1918 8919279 ~ 8919780 (+) True G150945
TU223385 other upstream 19387 8901143 ~ 8902311 (+) True G150940
TU223378 other upstream 29617 8890643 ~ 8892081 (+) False pdzk1ip1
TU223279 other upstream 304093 8614289 ~ 8617605 (+) True G150862
TU223137 other upstream 753426 8167449 ~ 8168272 (+) True G150756
TU223418 other downstream 66219 8988186 ~ 8988691 (+) True G150965
TU223769 other downstream 533334 9455301 ~ 9530165 (+) False march2
TU223817 other downstream 655712 9577679 ~ 9580151 (+) True G151232
TU223952 other downstream 966233 9888200 ~ 9893489 (+) False borcs8
TU223980 other downstream 1001580 9923547 ~ 9963634 (+) False LOC122328159

Expression Profile