Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU232612 |
| length | 997 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 2 |
| gene id | G157079 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056721.1 |
| NCBI id | CM032090.1 |
| chromosome length | 19062720 |
| location | 12239849 ~ 12241401 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0048732 | gland development | biological_process |
| GO:0009063 | cellular amino acid catabolic process | biological_process |
| GO:0009078 | pyruvate family amino acid metabolic process | biological_process |
| GO:0009080 | pyruvate family amino acid catabolic process | biological_process |
| GO:1901605 | alpha-amino acid metabolic process | biological_process |
| GO:1901606 | alpha-amino acid catabolic process | biological_process |
| GO:0046395 | carboxylic acid catabolic process | biological_process |
| GO:0042851 | L-alanine metabolic process | biological_process |
| GO:0042853 | L-alanine catabolic process | biological_process |
| GO:0061008 | hepaticobiliary system development | biological_process |
| GO:0044282 | small molecule catabolic process | biological_process |
| GO:0001889 | liver development | biological_process |
| GO:0006520 | cellular amino acid metabolic process | biological_process |
| GO:0006522 | alanine metabolic process | biological_process |
| GO:0006524 | alanine catabolic process | biological_process |
| GO:0016054 | organic acid catabolic process | biological_process |
| GO:0005102 | signaling receptor binding | molecular_function |
| GO:0005179 | hormone activity | molecular_function |
| GO:0030545 | receptor regulator activity | molecular_function |
| GO:0048018 | receptor ligand activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU232392 | lncRNA | upstream | 34454 | 12204256 ~ 12205395 (+) | True | G156931 |
| TU232390 | lncRNA | upstream | 34454 | 12204344 ~ 12205395 (+) | False | G156931 |
| TU232394 | lncRNA | upstream | 64934 | 12174530 ~ 12174915 (+) | True | G156933 |
| XR_006247800.1 | lncRNA | upstream | 201961 | 12030146 ~ 12037888 (+) | True | LOC122328486 |
| XR_006247799.1 | lncRNA | upstream | 204892 | 12030146 ~ 12034957 (+) | False | LOC122328486 |
| TU232614 | lncRNA | downstream | 4473 | 12245874 ~ 12246101 (+) | True | G157081 |
| TU232604 | lncRNA | downstream | 4816 | 12246217 ~ 12251978 (+) | False | LOC122328708 |
| TU232617 | lncRNA | downstream | 111689 | 12353090 ~ 12386381 (+) | False | G157084 |
| TU232620 | lncRNA | downstream | 120072 | 12361473 ~ 12386381 (+) | True | G157084 |
| TU232621 | lncRNA | downstream | 120294 | 12361695 ~ 12386381 (+) | False | G157084 |
| XM_043225450.1 | mRNA | upstream | 3872 | 12229968 ~ 12235977 (+) | True | zgc:154075 |
| XM_043225451.1 | mRNA | upstream | 3872 | 12229968 ~ 12235977 (+) | False | zgc:154075 |
| XM_043225452.1 | mRNA | upstream | 3872 | 12229968 ~ 12235977 (+) | False | zgc:154075 |
| XM_043225453.1 | mRNA | upstream | 3872 | 12229968 ~ 12235977 (+) | False | zgc:154075 |
| XM_043225454.1 | mRNA | upstream | 3872 | 12229968 ~ 12235977 (+) | False | zgc:154075 |
| XM_043224564.1 | mRNA | downstream | 4792 | 12246193 ~ 12251982 (+) | True | LOC122328708 |
| XM_043224563.1 | mRNA | downstream | 11324 | 12252725 ~ 12311254 (+) | False | pax7b |
| XM_043224558.1 | mRNA | downstream | 20094 | 12261495 ~ 12311254 (+) | True | pax7b |
| XM_043224559.1 | mRNA | downstream | 20094 | 12261495 ~ 12311254 (+) | False | pax7b |
| XM_043224560.1 | mRNA | downstream | 20095 | 12261496 ~ 12311254 (+) | False | pax7b |
| unassigned_transcript_2622 | other | upstream | 721313 | 11518465 ~ 11518536 (+) | True | trnae-uuc_33 |
| unassigned_transcript_2620 | other | upstream | 723978 | 11515799 ~ 11515871 (+) | True | trnaf-gaa_120 |
| unassigned_transcript_2619 | other | upstream | 726003 | 11513773 ~ 11513846 (+) | True | trnan-guu_36 |
| unassigned_transcript_2618 | other | upstream | 727151 | 11512625 ~ 11512698 (+) | True | trnan-guu_35 |
| TU231904 | other | upstream | 1062816 | 11174421 ~ 11177033 (+) | True | G156586 |
| XR_006247901.1 | other | downstream | 1812963 | 14054364 ~ 14054500 (+) | True | LOC122329331 |
| XR_006247900.1 | other | downstream | 1815284 | 14056685 ~ 14056821 (+) | True | LOC122329330 |
| XR_006247782.1 | other | downstream | 2058300 | 14299701 ~ 14343274 (+) | False | si:dkey-151g10.3 |
| TU233368 | other | downstream | 2442589 | 14683990 ~ 14685316 (+) | False | LOC122328906 |
| TU233419 | other | downstream | 2470746 | 14712147 ~ 14714533 (+) | True | LOC122328914 |
