RNA id: XM_043224005.1


Basic Information

Item Value
RNA id XM_043224005.1
length 1722
RNA type mRNA
GC content 0.48
exon number 5
gene id slc16a7
representative False

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 6598718 ~ 6602083 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ACTACAAAAAAGAGACCtgataagaagaagaaaagagagataaCAGGACATGAAGAACATGTAGCCAGCTGGAAGCTTTGCCAGCAGGCTCTCAACTGATGCAAAAAAGCTACCACCAACCTGGGCTACACCCCTCCAGACGGAGGCTGGGGCTGGGCCGTGGTGTTTGGGTCCTTCATCTCCATCGGCTTCTCTTACGCCTTCCCCAAATCCCTTACCATCTACTTTAAGGAAATCCAGGAGTATTTCTCCATCTCCTACAGCCAGATAGCCTGGGTGTCCTCCATCATGCTGGCTACCATGTACGCAGGAGGACCTGTGAGCAGTATTTTGGTGAACCGCTATGGGAGCCGCCCAGTGGTGATAGTCGGCGGGCTAATGGTTGGGGTTGCTATGGTAACGGCTTCCTTTGGCACCAccattttgcatttgtatttatgcGTGGGGGTCATCGGAGGCTTTGGCTTAGCTTTTAACCTGCAACCAGCTCTTACCATAATCGGTAAATACTTCCTTGTGAAAAGGCCCATAGCAAATGGCCTGGCGATGGCAGGTAGCCCTGTCTTCCTGTCCACCCTGGCTCCCCTCAACCAGTTTCTCTTCGACCATTTTGGATGGAGAGGAAGCTTCCTCACTCTCGGAGGAGTGATGCTCAACTGCTGCGTGGCAGGATCTCTTATGAGACCCATCGagataaaaatgaaacttcCGGTGAGCAAAACCACTGATGAGAACAATGCAGGAGAGCTGGACGTCACACCTCAAACAGCTGAGTCCAAGCAGTCGGGCTGTGCTGCAAAGATCAACCAATTCATTGATGTCTCCCTCTTTAAGCACAGAGGCTTCCTGATCTATCTCGTAGGGAATGTGCttatgttttttggattttttgctCCAGTTGTCTTCCTGGCACCATATGCCAAGCATCAAGGGATAGATGAGTACTCCGCAGCGTTCCTGCTCTCCATATTCGCTTTGGTAGACATGTTTGCTCGTCCAGGAACAGGTTTGGTCGCCAACACCAGGTGGATCAGACCCAAGATCCAGTATTTCTTCAGCTTCGCTGTGACATATAATGGCCTGTGCCATGTGATGTGTCCGCTCTTACCAGGTTACAGTGGTCTGGTGGTGTACGCCGTGTTTTTTGGCCTGGCTTTCGGCATGGTGTGTGCTCTTCTGTTCGAGACGCTCATGGATTTGGTGGGAGCCCAGCGGTTCTCCAGTGCGGTTGGGCTTGCTACCATTATAGAGTGTGGGCCTGTCCTGCTGGGGCCGCCCATCTCTGGTTTGCTGGTGGACATCTTCATGGACTATAAATACATGTACTTTGCTTGTGGCGTCATGATGCTGGCTGGAggcatctttctctttatcatGAACTATTACAACTACAGGTGGTTGGAAAAGGAACAGACACAGAGAAAGGTGGAGGGGCTGGAGATCGGCCTTGCCAATGAGGAGGACAAAGACAATGAAGAAGAGATCAAACTCAGCACAGAGGAAGAAGAGAAGTAGGAAACTCCACCAGCAAAGATTTATAAATCTgtcttctatctatctgtgtgtctgtcatACCATCTGTCTTTTGTTCTGTCTATCATTCTACCTGTCTATATCTGTCAGATCTATCTACTGAGAGGTGGatgttgaaattattttataatcttaACGTGCATTATGTTTCCATTGTGACAAGAGACATTAAAAGTAGTGCCAGAGGGA

Function

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0015711 organic anion transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0015355 secondary active monocarboxylate transmembrane transporter activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU230127 lncRNA downstream 84625 6509715 ~ 6514093 (-) True G155392
TU230121 lncRNA downstream 98969 6488624 ~ 6499749 (-) False G155391
TU230119 lncRNA downstream 109874 6485439 ~ 6488844 (-) True G155391
TU230159 lncRNA downstream 113803 6484654 ~ 6484915 (-) True G155413
TU230114 lncRNA downstream 246893 6349007 ~ 6351825 (-) True G155388
TU230195 lncRNA upstream 9930 6611993 ~ 6612524 (-) True G155435
TU230208 lncRNA upstream 22356 6624419 ~ 6625268 (-) True G155443
XR_006247875.1 lncRNA upstream 192040 6794103 ~ 6804919 (-) True LOC122328996
TU230288 lncRNA upstream 233312 6835375 ~ 6835589 (-) True G155508
TU230378 lncRNA upstream 235066 6837129 ~ 6838566 (-) True G155578
XM_043225070.1 mRNA downstream 76874 6515811 ~ 6521844 (-) True zgc:171775
XM_043224781.1 mRNA downstream 140799 6454153 ~ 6457919 (-) True krt18a.1
XM_043224782.1 mRNA downstream 145379 6450959 ~ 6453339 (-) True krt18a.2
XM_043225114.1 mRNA downstream 163743 6422212 ~ 6434975 (-) False eif4ba
XM_043224770.1 mRNA upstream 106649 6708712 ~ 6713207 (-) True adrm1
XM_043224772.1 mRNA upstream 106649 6708712 ~ 6712695 (-) False adrm1
XM_043224771.1 mRNA upstream 106649 6708712 ~ 6712695 (-) False adrm1
XM_043224768.1 mRNA upstream 106649 6708712 ~ 6712695 (-) False adrm1
XM_043224769.1 mRNA upstream 106649 6708712 ~ 6712684 (-) False adrm1
TU229892 other downstream 1118899 5477914 ~ 5479819 (-) False LOC122329286
TU229887 other downstream 1143671 5454417 ~ 5455047 (-) True G155227
TU229703 other downstream 1764198 4831818 ~ 4834520 (-) False LOC122329181
XR_006247892.1 other downstream 2403720 4173914 ~ 4194998 (-) True LOC122329268
TU230261 other upstream 128788 6730851 ~ 6731886 (-) True G155489
TU230276 other upstream 164545 6766608 ~ 6822978 (-) False rps21
TU230273 other upstream 171515 6773578 ~ 6822978 (-) False rps21
TU230275 other upstream 171515 6773578 ~ 6822978 (-) False rps21
TU230277 other upstream 171515 6773578 ~ 6822978 (-) False rps21

Expression Profile