Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00000883 |
| length | 1047 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 1 |
| gene id | XLOC_000504 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007112.7 |
| NCBI id | CM002885.2 |
| chromosome length | 59578282 |
| location | 41949303 ~ 41950349 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00003111 | lncRNA | upstream | 70411 | 41878443 ~ 41878892 (+) | True | XLOC_000502 |
| TCONS_00000876 | lncRNA | upstream | 91554 | 41849273 ~ 41857749 (+) | False | XLOC_000501 |
| TCONS_00003108 | lncRNA | upstream | 152187 | 41765616 ~ 41797116 (+) | False | XLOC_000500 |
| TCONS_00003112 | lncRNA | downstream | 33008 | 41983357 ~ 42026604 (+) | True | XLOC_000505 |
| TCONS_00003113 | lncRNA | downstream | 809399 | 42759748 ~ 42779658 (+) | True | XLOC_000508 |
| TCONS_00003114 | lncRNA | downstream | 1949662 | 43900011 ~ 43946307 (+) | False | XLOC_000512 |
| TCONS_00003115 | lncRNA | downstream | 1949740 | 43900089 ~ 43946307 (+) | False | XLOC_000512 |
| TCONS_00003116 | lncRNA | downstream | 1952107 | 43902456 ~ 43946307 (+) | True | XLOC_000512 |
| TCONS_00000881 | mRNA | upstream | 24819 | 41886830 ~ 41924484 (+) | False | XLOC_000503 |
| TCONS_00000880 | mRNA | upstream | 24819 | 41886830 ~ 41924484 (+) | False | XLOC_000503 |
| TCONS_00000882 | mRNA | upstream | 28709 | 41898919 ~ 41920594 (+) | True | XLOC_000503 |
| TCONS_00000874 | mRNA | upstream | 83317 | 41849152 ~ 41865986 (+) | False | XLOC_000501 |
| TCONS_00000879 | mRNA | upstream | 92800 | 41854298 ~ 41856503 (+) | True | XLOC_000501 |
| TCONS_00000885 | mRNA | downstream | 274420 | 42224769 ~ 42575493 (+) | False | XLOC_000507 |
| TCONS_00000886 | mRNA | downstream | 274420 | 42224769 ~ 42599619 (+) | False | XLOC_000507 |
| TCONS_00000887 | mRNA | downstream | 274420 | 42224769 ~ 42660207 (+) | False | XLOC_000507 |
| TCONS_00000888 | mRNA | downstream | 274711 | 42225060 ~ 42883057 (+) | False | XLOC_000507 |
| TCONS_00000889 | mRNA | downstream | 274847 | 42225196 ~ 43035729 (+) | False | XLOC_000507 |
| TCONS_00000875 | other | upstream | 89571 | 41849241 ~ 41859732 (+) | False | XLOC_000501 |
| TCONS_00000878 | other | upstream | 90267 | 41849306 ~ 41859036 (+) | False | XLOC_000501 |
| TCONS_00000877 | other | upstream | 90413 | 41849306 ~ 41858890 (+) | False | XLOC_000501 |
| TCONS_00000853 | other | upstream | 679416 | 41269773 ~ 41269887 (+) | True | XLOC_000489 |
| TCONS_00000851 | other | upstream | 823901 | 41125286 ~ 41125402 (+) | True | XLOC_000487 |
| TCONS_00000884 | other | downstream | 144275 | 42094624 ~ 42094739 (+) | True | XLOC_000506 |
| TCONS_00000891 | other | downstream | 512949 | 42463298 ~ 42883057 (+) | False | XLOC_000507 |
| TCONS_00000892 | other | downstream | 899849 | 42850198 ~ 43035640 (+) | False | XLOC_000507 |
| TCONS_00000894 | other | downstream | 1274128 | 43224477 ~ 43224591 (+) | True | XLOC_000509 |
| TCONS_00000895 | other | downstream | 1314774 | 43265123 ~ 43265241 (+) | True | XLOC_000510 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | CI01000049_09436515_09437579.mRNA | True | 1167 | mRNA | 0.49 | 1 | CI01000049 | 9436484 ~ 9437650 (-) |
