Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_007239178.2 |
| length | 1361 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 3 |
| gene id | id3 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035905.1 |
| NCBI id | CM008308.1 |
| chromosome length | 42966623 |
| location | 10084208 ~ 10087040 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0071542 | dopaminergic neuron differentiation | biological_process |
| GO:0045892 | negative regulation of transcription, DNA-templated | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0046983 | protein dimerization activity | molecular_function |
| id | description |
|---|---|
| K17694 | ID3; DNA-binding protein inhibitor ID3 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU106818 | lncRNA | downstream | 83390 | 9998895 ~ 10000818 (-) | True | G79269 |
| TU106817 | lncRNA | downstream | 85633 | 9997948 ~ 9998575 (-) | True | G79268 |
| TU106815 | lncRNA | downstream | 143275 | 9938191 ~ 9940933 (-) | True | G79266 |
| TU106799 | lncRNA | downstream | 183252 | 9899544 ~ 9900956 (-) | True | G79251 |
| XR_002650313.1 | lncRNA | downstream | 195005 | 9882476 ~ 9889203 (-) | True | LOC111193188 |
| TU106835 | lncRNA | upstream | 14496 | 10101536 ~ 10101746 (-) | True | G79285 |
| TU106838 | lncRNA | upstream | 18383 | 10105423 ~ 10105681 (-) | True | G79288 |
| TU106848 | lncRNA | upstream | 21764 | 10108804 ~ 10114162 (-) | False | G79290 |
| TU106841 | lncRNA | upstream | 24182 | 10111222 ~ 10112567 (-) | True | G79290 |
| XR_002650316.1 | lncRNA | upstream | 50943 | 10137983 ~ 10141355 (-) | True | LOC111193189 |
| XM_015603021.2 | mRNA | downstream | 12324 | 10054767 ~ 10071884 (-) | False | LOC103027354 |
| XM_007239179.3 | mRNA | downstream | 12324 | 10054767 ~ 10071884 (-) | True | LOC103027354 |
| XM_022672471.1 | mRNA | downstream | 43143 | 10040341 ~ 10041065 (-) | True | LOC111193127 |
| XM_022672682.1 | mRNA | downstream | 60601 | 9947512 ~ 10023607 (-) | True | LOC103045212 |
| XM_007239246.3 | mRNA | upstream | 46942 | 10133982 ~ 10171770 (-) | True | msra |
| XM_022672687.1 | mRNA | upstream | 118095 | 10205135 ~ 10222403 (-) | True | ythdf2 |
| XM_022672472.1 | mRNA | upstream | 207448 | 10294488 ~ 10307595 (-) | True | LOC103027264 |
| XM_022672689.1 | mRNA | upstream | 341345 | 10428385 ~ 10475469 (-) | True | LOC103026970 |
| XM_022672690.1 | mRNA | upstream | 341345 | 10428385 ~ 10475468 (-) | False | LOC103026970 |
| XR_002650315.1 | other | downstream | 12324 | 10034686 ~ 10071884 (-) | False | LOC103027354 |
| XR_002650312.1 | other | downstream | 245482 | 9837978 ~ 9838726 (-) | True | LOC111193187 |
| TU106477 | other | downstream | 1429898 | 8650937 ~ 8654310 (-) | False | LOC111193185 |
| XR_002650309.1 | other | downstream | 1442463 | 8632875 ~ 8641745 (-) | False | spdya |
| XR_002650306.1 | other | downstream | 2806424 | 7276400 ~ 7277784 (-) | True | LOC111193180 |
| TU107210 | other | upstream | 841600 | 10928640 ~ 10929596 (-) | True | G79582 |
| TU107214 | other | upstream | 1010127 | 11097167 ~ 11183929 (-) | False | ltbp1 |
| TU107221 | other | upstream | 1010127 | 11097167 ~ 11183839 (-) | False | ltbp1 |
| TU107228 | other | upstream | 1010127 | 11097167 ~ 11183839 (-) | False | ltbp1 |
| TU107591 | other | upstream | 1882924 | 11969964 ~ 11971939 (-) | True | G79865 |
