RNA id: TU95390


Basic Information

Item Value
RNA id TU95390
length 231
lncRNA type inter_gene
GC content 0.40
exon number 2
gene id G70703
representative True

Chromosome Information

Item Value
chromosome id NC_035904.1
NCBI id CM008307.1
chromosome length 27092187
location 2849950 ~ 2850374 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

atagagaagtggaggaggggaagaaggaaatgaggttagaaatagttagtgtgttagaggtgttaggagagtaagtgctctttgaagagctctgtcttcaggagtttattaaagatagtgagagattctcctgatctggtagtagaaggtagttagttagaggtgttaggagagtaagtgctctttgaagagctctgtcttcaggagtttattaaagatagtgagagattc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU95376 lncRNA downstream 83070 2766605 ~ 2766880 (-) True G70691
TU95355 lncRNA downstream 92116 2757143 ~ 2757834 (-) True G70673
TU95353 lncRNA downstream 148816 2673139 ~ 2701134 (-) False G70672
TU95415 lncRNA upstream 29550 2879924 ~ 2880124 (-) True G70728
TU95417 lncRNA upstream 32108 2882482 ~ 2882965 (-) True G70730
TU95420 lncRNA upstream 69668 2920042 ~ 2920385 (-) True G70733
TU95422 lncRNA upstream 90679 2941053 ~ 2941636 (-) True G70735
TU95423 lncRNA upstream 92979 2943353 ~ 2943607 (-) True G70736
XM_022671952.1 mRNA downstream 33415 2775243 ~ 2816535 (-) False anxa6
XM_022671950.1 mRNA downstream 33416 2764145 ~ 2816534 (-) False anxa6
XM_022671948.1 mRNA downstream 33416 2764145 ~ 2816534 (-) True anxa6
XM_022671951.1 mRNA downstream 33416 2764522 ~ 2816534 (-) False anxa6
XM_022671949.1 mRNA downstream 33417 2764145 ~ 2816533 (-) False anxa6
XM_007257737.3 mRNA upstream 108275 2958649 ~ 2982646 (-) True rmnd5b
XM_022671901.1 mRNA upstream 131673 2982047 ~ 3019753 (-) True LOC103025117
XM_007257736.3 mRNA upstream 173045 3023419 ~ 3027693 (-) True LOC103047641
XM_007257732.3 mRNA upstream 447836 3298210 ~ 3317552 (-) False tmem65
XM_022671966.1 mRNA upstream 447836 3298210 ~ 3317552 (-) True tmem65
TU95334 other downstream 104878 2735868 ~ 2745072 (-) False tnip1
TU95670 other upstream 497426 3347800 ~ 3353599 (-) True G70924
TU95798 other upstream 918787 3769161 ~ 3807099 (-) False LOC103042226
TU96020 other upstream 1561574 4411948 ~ 4413011 (-) True G71175
TU96095 other upstream 2031796 4882170 ~ 4884488 (-) True G71235
trnaw-cca_42 other upstream 2073626 4924000 ~ 4924071 (-) True trnaw-cca_42

Expression Profile