RNA id: TU417202


Basic Information

Item Value
RNA id TU417202
length 615
lncRNA type intronic
GC content 0.45
exon number 2
gene id G302995
representative True

Chromosome Information

Item Value
chromosome id NW_019172835.1
NCBI id APWO02000053.1
chromosome length 1257710
location 310070 ~ 311525 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

tcagccctcactacaacactacaactcccataattcacctgcatctattattatcagccctcactacaacactacaactcccataattcacctgcacccactattatcagccctcactacactacaactcccataattcacctgcacccactattatcagccctcactacaacactacaactcccataattcatctgcactcactattatcagccctcactacaacactacaactcccataattcacctgcacccactattatcagccctcactacactacaactcccataattcacctgcacccactattatcagccctcactacactacaactcccataattcacctgcacccactattatcagccctcactacaactcccataattcacctgcacccactattatcagccctcactacaacactacaactcccataattcacctgcacccactattatcagccctcactacaactcccataattcacctgcatccactattatcagccctcactacaactcccataattcacctgcacccactattatcagccctcactacactacaactcccataattcacctgcacccactattatcagccctcactaca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU417171 lncRNA downstream 87163 222675 ~ 222907 (-) True G302977
TU417167 lncRNA downstream 92403 217381 ~ 217667 (-) True G302974
TU417164 lncRNA downstream 158972 150439 ~ 151098 (-) True G302971
TU417114 lncRNA downstream 184598 116154 ~ 125472 (-) True G302956
TU417122 lncRNA downstream 194248 110032 ~ 115822 (-) False G302956
TU417215 lncRNA upstream 33533 345058 ~ 345622 (-) False G303005
TU417216 lncRNA upstream 33533 345058 ~ 345622 (-) False G303005
TU417218 lncRNA upstream 33533 345058 ~ 345622 (-) True G303005
TU417219 lncRNA upstream 33533 345058 ~ 345622 (-) False G303005
TU417192 lncRNA upstream 49349 360874 ~ 375179 (-) True G302990
XM_022665556.1 mRNA downstream 239184 66206 ~ 70886 (-) True LOC103046750
XM_022665544.1 mRNA downstream 250568 43903 ~ 59502 (-) True LOC111191239
XM_022665543.1 mRNA downstream 278967 12863 ~ 31103 (-) True LOC111191238
XM_022665539.1 mRNA upstream 53045 364570 ~ 376040 (-) False LOC103045831
XM_022665540.1 mRNA upstream 53045 364570 ~ 376040 (-) False LOC103045831
XM_022665538.1 mRNA upstream 53045 364570 ~ 376040 (-) True LOC103045831
XM_022665537.1 mRNA upstream 137612 449137 ~ 465932 (-) True LOC111191234
XM_007236634.3 mRNA upstream 302939 614464 ~ 625347 (-) True LOC103034629
TU417066 other downstream 249928 16646 ~ 60142 (-) False G302937

Expression Profile