Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000001_06146900_06161111.mRNA |
| length | 4668 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 24 |
| gene id | CI01000001_06146900_06161111 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000001 |
| NCBI id | null |
| chromosome length | 13537560 |
| location | 6146563 ~ 6161111 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| K11847 | USP19; ubiquitin carboxyl-terminal hydrolase 19 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU18606 | lncRNA | downstream | 21685 | 6123077 ~ 6124878 (-) | True | G16613 |
| TU18423 | lncRNA | downstream | 207019 | 5924884 ~ 5939544 (-) | True | G16446 |
| TU18560 | lncRNA | downstream | 316907 | 5829347 ~ 5829656 (-) | True | G16573 |
| TU18543 | lncRNA | downstream | 426887 | 5719395 ~ 5719676 (-) | True | G16556 |
| TU18542 | lncRNA | downstream | 429535 | 5716823 ~ 5717028 (-) | True | G16555 |
| TU18644 | lncRNA | upstream | 106871 | 6267982 ~ 6268417 (-) | True | G16640 |
| TU18654 | lncRNA | upstream | 107964 | 6269075 ~ 6270348 (-) | True | G16650 |
| TU18657 | lncRNA | upstream | 123081 | 6284192 ~ 6284465 (-) | False | CI01000001_06285353_06286524 |
| TU18658 | lncRNA | upstream | 124800 | 6285911 ~ 6286155 (-) | True | CI01000001_06285353_06286524 |
| TU18660 | lncRNA | upstream | 127676 | 6288787 ~ 6288992 (-) | True | G16656 |
| CI01000001_06140368_06142824.mRNA | mRNA | downstream | 3739 | 6139251 ~ 6142824 (-) | True | CI01000001_06140368_06142824 |
| CI01000001_06136913_06138676.mRNA | mRNA | downstream | 7887 | 6136859 ~ 6138676 (-) | True | CI01000001_06136913_06138676 |
| CI01000001_06126262_06133051.mRNA | mRNA | downstream | 13512 | 6125776 ~ 6133051 (-) | True | CI01000001_06126262_06133051 |
| CI01000001_06104303_06118257.mRNA | mRNA | downstream | 28142 | 6104094 ~ 6118421 (-) | True | CI01000001_06104303_06118257 |
| CI01000001_06071846_06084571.mRNA | mRNA | downstream | 61382 | 6071671 ~ 6085181 (-) | True | CI01000001_06071846_06084571 |
| CI01000001_06167374_06195286.mRNA | mRNA | upstream | 5570 | 6166681 ~ 6196226 (-) | True | CI01000001_06167374_06195286 |
| CI01000001_06209325_06237504.mRNA | mRNA | upstream | 48200 | 6209311 ~ 6237504 (-) | True | CI01000001_06209325_06237504 |
| CI01000001_06275328_06282035.mRNA | mRNA | upstream | 112690 | 6273801 ~ 6282035 (-) | True | CI01000001_06275328_06282035 |
| CI01000001_06285353_06286524.mRNA | mRNA | upstream | 122667 | 6283778 ~ 6286524 (-) | False | CI01000001_06285353_06286524 |
| CI01000001_06307614_06307988.mRNA | mRNA | upstream | 146293 | 6307404 ~ 6308353 (-) | True | CI01000001_06307614_06307988 |
| TU18440 | other | downstream | 916978 | 5222777 ~ 5229585 (-) | True | G16462 |
| TU18272 | other | downstream | 1188721 | 4950689 ~ 4957842 (-) | True | G16332 |
| TU17581 | other | downstream | 1345168 | 4800901 ~ 4801395 (-) | True | G15736 |
| TU17476 | other | downstream | 1418356 | 4614175 ~ 4618357 (-) | True | G15639 |
| TU18669 | other | upstream | 182993 | 6344104 ~ 6347955 (-) | True | G16664 |
| TU18776 | other | upstream | 423369 | 6584480 ~ 6615589 (-) | False | G16753 |
| TU19958 | other | upstream | 676414 | 6837525 ~ 6890414 (-) | False | G17789 |
| TU19985 | other | upstream | 774966 | 6936077 ~ 6937223 (-) | True | CI01000001_06932075_06937182 |
| TU20141 | other | upstream | 1090200 | 7251311 ~ 7253254 (-) | False | G17911 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00044038 | False | 5123 | mRNA | 0.50 | 26 | NC_007134.7 | 20149231 ~ 20177527 (-) |
| bowfin (Amia calva) | AMCG00017028 | True | 5302 | mRNA | 0.51 | 27 | CM030122.1 | 42515426 ~ 42551765 (+) |
