RNA id: TU32637


Basic Information

Item Value
RNA id TU32637
length 369
RNA type TUCP
GC content 0.35
exon number 1
gene id G28859
representative True

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 8599235 ~ 8599603 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GATGATATTATGCACTGTAGATGATGATAACTTCAAACTCTTTGCAATTTTTCTCTGAGAAACTCCTTTCTGATATTGCTCCACTATTTTTAGCTGTAGCATTGGGGGGAATTGGTGATCCTCTGCCCATCTTGACTTCTGAGAGACACTGCCACTCTGAGAGGCTCTTTTTATACCCAATCATGTTACCAATTGACCTAATAAGTTGCAAATTGGTCCTCCAGCTGTTCCTTATATGTACATTTAACTTTTCCGGCCTCTTATTGCTACCTGTCCCAACTTTTTTGGAATGTGTAGCTCTCATGAAATCCAAAATGAGCCAATATTTGGCATGACATTTCAAAATGTCTCACTTTCAACATCTGATAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU32636 lncRNA upstream 1452 8595852 ~ 8597783 (+) True G28858
TU32631 lncRNA upstream 44672 8554232 ~ 8554563 (+) True G28855
TU32624 lncRNA upstream 71560 8527445 ~ 8527675 (+) True G28849
TU32623 lncRNA upstream 127351 8470745 ~ 8471884 (+) True G28848
TU32618 lncRNA upstream 188015 8410726 ~ 8411220 (+) False G28843
TU32639 lncRNA downstream 3020 8602623 ~ 8602843 (+) True G28861
TU32640 lncRNA downstream 3492 8603095 ~ 8603461 (+) True G28862
TU32641 lncRNA downstream 4002 8603605 ~ 8603927 (+) True G28863
TU32645 lncRNA downstream 6711 8606314 ~ 8606585 (+) True G28867
TU32650 lncRNA downstream 16618 8616221 ~ 8616535 (+) True G28872
CI01000004_08573940_08586930.mRNA mRNA upstream 12065 8572741 ~ 8587170 (+) True CI01000004_08573940_08586930
CI01000004_08518587_08521540.mRNA mRNA upstream 77574 8518462 ~ 8521661 (+) True CI01000004_08518587_08521540
CI01000004_08507941_08515797.mRNA mRNA upstream 82927 8507941 ~ 8516308 (+) True CI01000004_08507941_08515797
CI01000004_08458998_08503889.mRNA mRNA upstream 95243 8458998 ~ 8503992 (+) True CI01000004_08458998_08503889
CI01000004_08414451_08436256.mRNA mRNA upstream 162972 8414316 ~ 8436263 (+) False CI01000004_08414451_08436256
CI01000004_08618566_08669147.mRNA mRNA downstream 18963 8618566 ~ 8669147 (+) True CI01000004_08618566_08669147
CI01000004_08693419_08703448.mRNA mRNA downstream 93816 8693419 ~ 8704156 (+) True CI01000004_08693419_08703448
CI01000004_08730011_08731219.mRNA mRNA downstream 130408 8730011 ~ 8732509 (+) True CI01000004_08730011_08731219
CI01000004_08736175_08742487.mRNA mRNA downstream 136572 8736175 ~ 8744387 (+) True CI01000004_08736175_08742487
CI01000004_08746864_08765484.mRNA mRNA downstream 146881 8746484 ~ 8765905 (+) True CI01000004_08746864_08765484
TU32590 other upstream 148008 8439958 ~ 8451227 (+) True G28818
TU32454 other upstream 942852 7654772 ~ 7654879 (+) True G28706
TU32079 other upstream 2024814 6572819 ~ 6574421 (+) True G28354
TU32005 other upstream 2097148 6470028 ~ 6502087 (+) True G28302
TU31830 other upstream 2866234 5732589 ~ 5733001 (+) True G28165
TU32792 other downstream 376835 8976438 ~ 8980984 (+) False CI01000004_08976512_08980033
TU32793 other downstream 376835 8976438 ~ 8980984 (+) True CI01000004_08976512_08980033
TU34813 other downstream 1897773 10497376 ~ 10497788 (+) True G30797
TU35938 other downstream 3037648 11637251 ~ 11642400 (+) True G31710
TU35811 other downstream 3065170 11664773 ~ 11665473 (+) False G31611

Expression Profile