RNA id: TU142843



Basic Information


Item Value
RNA id TU142843
length 237
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G125801
representative True

Chromosome Information


Item Value
chromosome id CI01000024
NCBI id null
chromosome length 8644187
location 7980858 ~ 7981094 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GTGATGGAGTGGCTAAGTATGTCTCCAGACCTGAACCCTATTGAGCACCTGTGGGGCATCCTCAAGCGGAAGGTGGAGAAGCACCATGTGTCTAACATCCAGCAGCTCCGTGATGTCATTATGGAGAAGTGGAAGAGGATCCCAGCAACAACCTGTGCAGCTCTGGTGAATTCCATGCCCAGGAGGATTAAGGCAGTGCTAAATAACAATGGTGCTCACACAAAATATTGACACTTT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU142840 lncRNA downstream 4811 7975791 ~ 7976047 (-) True G125798
TU142743 lncRNA downstream 31471 7949030 ~ 7949387 (-) True G125718
TU142758 lncRNA downstream 45301 7916804 ~ 7935557 (-) True G125722
TU142760 lncRNA downstream 64759 7905914 ~ 7916099 (-) True G125724
TU142762 lncRNA downstream 163371 7802573 ~ 7817487 (-) True G125726
TU142844 lncRNA upstream 1820 7982914 ~ 7983167 (-) True G125802
TU142861 lncRNA upstream 34558 8015652 ~ 8015945 (-) True G125819
TU142867 lncRNA upstream 46688 8027782 ~ 8027990 (-) True G125825
TU142869 lncRNA upstream 53215 8034309 ~ 8034634 (-) True G125827
TU142877 lncRNA upstream 62814 8043908 ~ 8044118 (-) True G125835
CI01000024_07858315_07901816.mRNA mRNA downstream 78920 7858157 ~ 7901938 (-) False CI01000024_07858315_07901816
CI01000024_07847824_07855700.mRNA mRNA downstream 124517 7847573 ~ 7856341 (-) True CI01000024_07847824_07855700
CI01000024_07697986_07832289.mRNA mRNA downstream 148569 7697986 ~ 7832289 (-) True CI01000024_07697986_07832289
CI01000024_07672858_07695341.mRNA mRNA downstream 285033 7672593 ~ 7695825 (-) True CI01000024_07672858_07695341
CI01000024_07604312_07619531.mRNA mRNA downstream 361327 7604312 ~ 7619531 (-) True CI01000024_07604312_07619531
CI01000024_08161023_08259943.mRNA mRNA upstream 179196 8160290 ~ 8259943 (-) True CI01000024_08161023_08259943
CI01000024_08260814_08264845.mRNA mRNA upstream 279720 8260814 ~ 8264845 (-) True CI01000024_08260814_08264845
CI01000024_08292984_08380058.mRNA mRNA upstream 311890 8292984 ~ 8380058 (-) True CI01000024_08292984_08380058
CI01000024_08450580_08455758.mRNA mRNA upstream 469468 8450562 ~ 8457764 (-) True CI01000024_08450580_08455758
CI01000024_08460577_08479254.mRNA mRNA upstream 479375 8460469 ~ 8479690 (-) True CI01000024_08460577_08479254
TU142839 other downstream 4811 7975667 ~ 7976047 (-) False G125798
TU142437 other downstream 622754 7357705 ~ 7358104 (-) False G125457
TU142439 other downstream 622754 7357754 ~ 7358104 (-) True G125457
TU142441 other downstream 623263 7357237 ~ 7357595 (-) False G125457
TU140468 other downstream 4038934 3936042 ~ 3937057 (-) True G123701

Expression Profile