Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00016712 |
| length | 773 |
| RNA type | processed_transcript |
| GC content | 0.45 |
| exon number | 4 |
| gene id | XLOC_008326 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007126.7 |
| NCBI id | CM002899.2 |
| chromosome length | 48040578 |
| location | 9294620 ~ 9315566 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0048545 | response to steroid hormone | biological_process |
| GO:0055085 | transmembrane transport | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0022857 | transmembrane transporter activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-040426-2230 | Predicted to enable transmembrane transporter activity. Acts upstream of or within response to steroid hormone. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in intestinal bulb; liver; ovary; and yolk syncytial layer. Orthologous to human SLC37A4 (solute carrier family 37 member 4). |
| ensembl_id | ENSDART00000142627 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00016708 | lncRNA | upstream | 92678 | 9205264 ~ 9211131 (+) | True | XLOC_008325 |
| TCONS_00016701 | lncRNA | upstream | 538780 | 8762580 ~ 8765029 (+) | True | XLOC_008319 |
| TCONS_00018889 | lncRNA | upstream | 539696 | 8762474 ~ 8764113 (+) | False | XLOC_008319 |
| TCONS_00016691 | lncRNA | upstream | 1497889 | 7805779 ~ 7805920 (+) | True | XLOC_008312 |
| TCONS_00018758 | lncRNA | upstream | 1566278 | 7734489 ~ 7737531 (+) | True | XLOC_008311 |
| TCONS_00016715 | lncRNA | downstream | 102675 | 9414153 ~ 9418151 (+) | True | XLOC_008329 |
| TCONS_00016716 | lncRNA | downstream | 140500 | 9451978 ~ 9457382 (+) | True | XLOC_008330 |
| TCONS_00018759 | lncRNA | downstream | 329209 | 9640687 ~ 9649456 (+) | False | XLOC_008331 |
| TCONS_00018890 | lncRNA | downstream | 336140 | 9647618 ~ 9648249 (+) | True | XLOC_008331 |
| TCONS_00018760 | lncRNA | downstream | 368543 | 9680021 ~ 9684915 (+) | True | XLOC_008332 |
| TCONS_00016709 | mRNA | upstream | 6246 | 9294620 ~ 9297563 (+) | False | XLOC_008326 |
| TCONS_00016706 | mRNA | upstream | 119360 | 9117330 ~ 9184449 (+) | False | XLOC_008324 |
| TCONS_00016707 | mRNA | upstream | 119752 | 9121054 ~ 9184057 (+) | True | XLOC_008324 |
| TCONS_00016705 | mRNA | upstream | 214302 | 9072821 ~ 9089507 (+) | True | XLOC_008323 |
| TCONS_00016704 | mRNA | upstream | 234637 | 9053059 ~ 9069172 (+) | True | XLOC_008322 |
| TCONS_00016713 | mRNA | downstream | 15774 | 9327252 ~ 9353696 (+) | True | XLOC_008327 |
| TCONS_00016714 | mRNA | downstream | 75872 | 9387350 ~ 9387790 (+) | True | XLOC_008328 |
| TCONS_00016717 | mRNA | downstream | 550495 | 9861973 ~ 9873144 (+) | True | XLOC_008333 |
| TCONS_00016729 | mRNA | downstream | 2070054 | 11381532 ~ 11394322 (+) | True | XLOC_008341 |
| TCONS_00016730 | mRNA | downstream | 2116142 | 11427620 ~ 11443214 (+) | True | XLOC_008342 |
| TCONS_00016703 | other | upstream | 264645 | 9039050 ~ 9039164 (+) | True | XLOC_008321 |
| TCONS_00016700 | other | upstream | 571943 | 8731752 ~ 8731866 (+) | True | XLOC_008318 |
| TCONS_00016699 | other | upstream | 620872 | 8682822 ~ 8682937 (+) | True | XLOC_008317 |
| TCONS_00016681 | other | upstream | 2531689 | 6770586 ~ 6772120 (+) | True | XLOC_008302 |
| TCONS_00016680 | other | upstream | 2576727 | 6678521 ~ 6727082 (+) | True | XLOC_008301 |
| TCONS_00016719 | other | downstream | 584380 | 9895858 ~ 9895986 (+) | True | XLOC_008335 |
| TCONS_00016731 | other | downstream | 2253913 | 11565391 ~ 11565509 (+) | True | XLOC_008343 |
| TCONS_00016757 | other | downstream | 4213396 | 13524874 ~ 13524988 (+) | True | XLOC_008360 |
| TCONS_00016758 | other | downstream | 4646244 | 13957722 ~ 13957850 (+) | True | XLOC_008361 |
| TCONS_00016791 | other | downstream | 6082764 | 15394242 ~ 15401640 (+) | True | XLOC_008381 |
