RNA id: TU264462


Basic Information

Item Value
RNA id TU264462
length 216
lncRNA type antisense_over
GC content 0.30
exon number 1
gene id G233051
representative True

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 7389362 ~ 7389577 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CTGACATATTTTCACATAAATAATCATTCAGATACAGAACAAGAAAACCAGACTCTACCAAATGAATGGTTATGGGTCCTGCTTTAAATACTATGCATATTTGGCTATGTTTAGAAGGGAATACCAACATACTATTTACTGGATACTGTGCAGAATACACTGGATACTATTCTCTAATACACTGTAAAAAATTATTTTAATTTATCACAACATTTT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU264461 lncRNA upstream 14 7389144 ~ 7389348 (+) True G233050
TU264419 lncRNA upstream 2178 7362203 ~ 7387184 (+) True G233010
TU264445 lncRNA upstream 42359 7346803 ~ 7347003 (+) True G233034
TU264310 lncRNA upstream 59347 7299680 ~ 7330015 (+) True G232904
TU264313 lncRNA upstream 169713 7218139 ~ 7219649 (+) True G232907
TU264464 lncRNA downstream 1001 7390578 ~ 7390894 (+) True G233053
TU264476 lncRNA downstream 30851 7420428 ~ 7421357 (+) True G233065
TU264427 lncRNA downstream 119189 7508766 ~ 7513700 (+) True G233017
TU264429 lncRNA downstream 124827 7514404 ~ 7516606 (+) True G233018
TU264517 lncRNA downstream 342278 7731855 ~ 7732104 (+) True G233096
CI01000054_07271120_07280248.mRNA mRNA upstream 108997 7270906 ~ 7280365 (+) True CI01000054_07271120_07280248
CI01000054_07252016_07252204.mRNA mRNA upstream 136945 7251801 ~ 7252417 (+) True CI01000054_07252016_07252204
CI01000054_07240475_07241355.mRNA mRNA upstream 146904 7240423 ~ 7242458 (+) True CI01000054_07240475_07241355
CI01000054_07209423_07216395.mRNA mRNA upstream 172152 7209423 ~ 7217210 (+) True CI01000054_07209423_07216395
CI01000054_07198599_07202146.mRNA mRNA upstream 187069 7198599 ~ 7202293 (+) True CI01000054_07198599_07202146
CI01000054_07438245_07449632.mRNA mRNA downstream 47855 7437432 ~ 7449712 (+) True CI01000054_07438245_07449632
CI01000054_07454627_07503082.mRNA mRNA downstream 65050 7454627 ~ 7503082 (+) True CI01000054_07454627_07503082
CI01000054_07539134_07556858.mRNA mRNA downstream 149557 7539134 ~ 7558395 (+) True CI01000054_07539134_07556858
CI01000054_07582152_07584554.mRNA mRNA downstream 192403 7581980 ~ 7584692 (+) True CI01000054_07582152_07584554
CI01000054_07599184_07601743.mRNA mRNA downstream 208329 7597906 ~ 7603125 (+) True CI01000054_07599184_07601743
TU264264 other upstream 500859 6887912 ~ 6888503 (+) False G232870
TU264265 other upstream 500859 6888114 ~ 6888503 (+) True G232870
TU264006 other upstream 1013468 6374850 ~ 6375894 (+) True G232659
TU263932 other upstream 1082502 6304307 ~ 6304441 (+) True G232608
TU263881 other upstream 1347499 5993660 ~ 6041863 (+) True G232558
TU264435 other downstream 177946 7567523 ~ 7609893 (+) True G233024
TU264744 other downstream 915022 8304599 ~ 8304949 (+) True G233306
TU264679 other downstream 916360 8305937 ~ 8306053 (+) True G233242
TU267167 other downstream 2998559 10388136 ~ 10392378 (+) True G235560
TU267998 other downstream 4175399 11564976 ~ 11565121 (+) True G236317

Expression Profile