CI01000054_07539134_07556858 (ZBTB10)


Basic Information

Item Value
gene id CI01000054_07539134_07556858
gene name ZBTB10
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 7539134 ~ 7558395 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000054_07539134_07556858.mRNA
ATGTCCGGAGAGCGAAGCCGCAGGTCGCTGGCTTTCCGAGGAGGTGGATTAGCCGTCACCGGTGCCAGTGCCGTCGGAGGAGGCAGCAACGGCAACAGCTGTGAGGCCCCGGCCTGTCAAGACCGACATTTAAACGGGAACAGGCCGGATCAAGAGGACGATAGGGATTTGGGGGCGAAAGGACCATCGCTGGGGAAAGTCGAGGGCGGGGGGTCCGTCAGCGACAGCACGGAGCCGGAGGAGGACGAGGACCCGGAAGGGGGCAGTTGGACAGCGGGAAAACATCATGACAGAGGCGCTTTAAACAGCGTAATGGTGAAAACCGAGAGCTGTAAGTGGGCGACCGGCAACGGGGTGAACCGGGAGGACGGTAGCACGGGAGAGGCGGAGGAAGCGACCGCTAAAAAGCCGCTGCTGGAGATGAGACCTCAGACGCTGCTGTTGCAGAAACACTCGCTCTTCCAAGACTCCTGGCTGCAGGAGTTTCCCTGGCTCAAATTCAGCCAGGAAACAGGACTCATGTCTTGCTCCTGGTGCCATAACATCGCCACCAACAACAGCGACGAGCTGGTAAAAGGCAGTCGGAATTACAAACGGGCCTTGCTGCTGAGACATCACCTGTCCTCGGAGCACGGCAGGAATGACCCGACCAAACAGGTACGTCTACACTGCGATATAATGGAGACGGGGACAGGCGGATATGCGACGAAGCCGCGTTGTGCTATTCGGTCTTTAGTTAACAAATGCCGATGTTTTCCATGTCTTTTTGGAGCGGGAATGCTCTTTTTGAAGTTGTTTAGAGATGCTGTGTTCCTGGTTTTTGCAGTAGAATCCCTTAGGATTGCGTTGTATGATAATGTCTGTCTAATCAGGGAGATGGAAAGGCCTGAGGACGTGGAGAGCCCGGAGGTGGAGGACTACAGGAACAAGCCCAACGAGAACTCGTACTGCTACCAGCTTCTGCAGGAGCTGGACAAGCAACGCAAGAACGGCATCCTCTGCGATGTCAACATCATGGTGTGCGGCCAGATGTTCAAGGCACACAAGAACATCCTGGTCGCCGGGAGCCGCTACTTCAAGACCCTCTACTGCCTGACGAAGAGCGAGAGCTGTGACCAAACTACGATCACGCACCTGGATGTGGCGGCCGTGCAGGGCTTTTCCGTCATCCTGGACTTCCTGTACTCTGGCAACCTTTTTCTCACCAGCCAGAATGCCATTGAGGTGATGTCTGTGGCGAGTTACCTCCAGATGACCGAAGTGGTCCAGTCCTGTCGCGCCTTCATCAAAGACGCCCTCAACATAAGCATCAAGCAGGAAGCCCCTGACTCCGTGGTGGTCGACTACAACAAGCGCCGGACGGTGGCGAAAGACTGCCAGGGTGCCGACAAGAAGCCCAGCAACTTCTGGGCAACCAGCATCCTGTCCAAGCTGTCCATCAAGGCCAGTGGACAAGTGAAGGATGAACCCAGCGACGTGGAGGTGTCTGGGGGAGAAGGTTGCGCATTGGGAAGCTCCAGTTGGGGAGGAGAGAACTCGTCAGAGTCCACAGAGATGGAGCCCCAGGGTCCGGGGCCGGTGTTCATCTGGAACGAGCCAGATCCTGGCACTGGGGTGGCCATTAAGAGGGAGGAGCGCCCTGAGCCAGGAAGCAGAAAGCGGAAAAAACAGGCCGCCAAGCGCTTTGTCTACAACATCCCACCTGAGCCGGAAGAGGGTTTCGATGAGGGCATGTTCATCCAACCATCTGCCTCCTACACCAGGGAGGACTTCTCTTACCTCTCAGAGAATGCTGGTGAAGCGCCTGAAAATGCCCTTAATAAGCTGAAGTGTCCCCACTGTAACTACATTGCCAAGCACCGGCGAACACTAAAGAGGCACCTGATCATCCACTCGGGCGTGCGTTCTTTCAGCTGTGACATCTGCGGAAAGCTGTTCACTCGCAGAGAACACGTCAAGAGACATTCCCTGGTGCACAAAAAGGATAAGAAATACAAATGTATGGTATGCAAAAAGATCTTCATGCTGGCGGCCAGCGTGGGCATACGGCACGGTTCTCGCCGCTATGGCGTGTGCGTGGAGTGCGCAGACTCCCACCAAGGCACGCAGGAGGGTCTGGAGGGCATGCAGGACCTGGAATACGCACGCGACGAAGACTTTGATGAGGCCGTAGAGGGAGACGAGGACATGGAGGCGGAAGAGGGGGAGCCCAATGAGATTGACCAATCCAACTGCGAGGGTGATGCGGGTACCATCCCCGAGAAGGACTAATTTAGACATAACCTGGTAGAGAAACAAATCAAAATGCAAAGAAAAAATAGCTGGGAAACAATCAACAATTCCAAAGTGCTATCAAACCTCTTTGTTGCACGTCAAGTTATGTCAAAGAGATATATAGCTTTGTTAGAGAGGGACTCCAATATTTAAAGATTGTTCTATGTGTCAGAGTCTGGGCCGTGTGCCTGTCAGAGAAAGAGGTATAATGATATATAACAAAAAAAATCAGGTTTTTCTGTGATGTATTTTTTTTTTTTTTTTTTGTAGGGGATGAGGGTGTACAGCGTTTTTGAGTTATAATAGGCCAATCATATTAAAAGAAATATTAATTATTTAATTTATGAAGAAAGATATTATGGTCTTATGAAATGATAGAATTAGATTTTTTTTTTTTTTTTTTTTTTTTTAAATGTACGTCTGCTTATTTTCAGTTCATAACTGCGCTTCCTGACAGACCTGATCGTATATTGCTCAGAGGAGGATCTCGATAAAGGAGCATTATAGAAATTCCGCCTACAGGAAGATTTTTTTTTTTTTTTTTTTTTTTTTGTGTATGTGTGTTTCCTTTCTAGTTAAATGTTGTCATGAAAATTTTTATGAAATATATAAATATATATATATTTTCCTTTTCCCTGCACAAATCTTGGAACCAAAAATCTGTTTTGTGACTCTAATTGACCACAGCCATATTTATGATTAAGTTATACAGGGCTGTTAGATCGTGCCAAGCAGAACGCACACCAAGATTTTTTGCAGGACACAAAACTACTGAAAATGCTGAGAGAACATAAAGCAGAGAAATATAAGAAGAAGAAAAAAAAAAAACAGAAAAAGAGAAAATTATAAAATATAAGGGGAATATATTATTATTGCTAGCTTTATTTGAATCACAGCATCACAGTAACACTTTATAAAGCATTTTGACATTCACTTAAAGCTTGAATTTTGCCAAATGATGGAAACGTTTGGTGCTGTAACGCTTTTATTTTTATTCTTATTTTTTAAAATACTGGACCTACAAGCTGTATATGATGTTAATAATCGTAAAGCCTACTCAACTCAGTTATACTAATCAGCTTTGTATTTTACACTGTTGTGCTAAGGAGCCTATCAGGTATGCTTTTCTGTTTTTAACGTCTTTTCTATTAAATGCACATACATACATACACACATACATACCATTTGTTGTTGTTAAAACTACTGGCAGTACTTGTATAGATGGAACGACCTGATGTTCTTGAGTTGGTTAGTGGTACTGAGCTTACTTTGAATCACTTGAACGACCTGTGTACCATTTTTTTTGAAGAATGCAGATGGAAAGAGGTGGTTTGCAATAGACTTCATTTTGGTCCCCCCTTAACATTTGCGATCATTTCGGTTTCGTTTATTTGGACTTTGTCACGTGTCTGCTGAGTGGAAAACACTTTGCTTGTGCTGACGTAGAGCGGAAGGTCTATGAAAATGCATAGACGGGCACTTACTGTTCTACGTTTGATAATTTCTTATTTCCCCAAAGCCGGTCTGGATGGAA

Function

symbol description
zbtb10 Predicted to enable RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Is expressed in several structures, including anterior axial hypoblast; forerunner cell group; nervous system; neural tube; and presumptive telencephalon. Orthologous to human ZBTB10 (zinc finger and BTB domain containing 10).

NR:

description
unnamed protein product

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG:

id description
K10497 ZBTB10, RINZF; zinc finger and BTB domain-containing protein 10

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000054_07539134_07556858.mRNA True 3808 mRNA 0.47 5 7539134 7558395

Neighbor

gene id symbol gene type direction distance location
CI01000054_07454627_07503082 ZNF704 coding upstream 36052 7454627 ~ 7503082 (+)
CI01000054_07438245_07449632 PAG1 coding upstream 89422 7437432 ~ 7449712 (+)
CI01000054_07271120_07280248 NA coding upstream 258769 7270906 ~ 7280365 (+)
CI01000054_07252016_07252204 NA coding upstream 286717 7251801 ~ 7252417 (+)
CI01000054_07240475_07241355 NA coding upstream 296676 7240423 ~ 7242458 (+)
CI01000054_07582152_07584554 NA coding downstream 23585 7581980 ~ 7584692 (+)
CI01000054_07599184_07601743 HEY1 coding downstream 39511 7597906 ~ 7603125 (+)
CI01000054_07620269_07633084 NA coding downstream 60342 7618737 ~ 7633111 (+)
CI01000054_07675827_07711906 FAM65B coding downstream 117432 7675827 ~ 7711982 (+)
CI01000054_07719547_07722201 C11H6ORF62, CUNH6ORF62, C3H6ORF62, CLG10H6ORF62, C12H6ORF62, C23H6ORF62, C6H6ORF62, C18H6ORF62, CLG22H6ORF62, C6ORF62, CSGR19H6ORF62, C4H6ORF62, C24H6ORF62, C2H6ORF62, CLG11H6ORF62, C16H6ORF62, BC005537 coding downstream 161102 7719497 ~ 7722271 (+)
G233018 NA non-coding upstream 22528 7514404 ~ 7516606 (+)
G233017 NA non-coding upstream 25434 7508766 ~ 7513700 (+)
G233065 NA non-coding upstream 117777 7420428 ~ 7421357 (+)
G233053 NA non-coding upstream 148240 7390578 ~ 7390894 (+)
G233051 NA non-coding upstream 149557 7389362 ~ 7389577 (+)
G233096 NA non-coding downstream 173460 7731855 ~ 7732104 (+)
G233025 NA non-coding downstream 176426 7734821 ~ 7736502 (+)
G233030 NA non-coding downstream 227682 7786077 ~ 7812277 (+)
G233026 NA non-coding downstream 232635 7791030 ~ 7793543 (+)
G233123 NA non-coding downstream 270875 7829270 ~ 7829472 (+)
G232870 NA other upstream 650631 6887912 ~ 6888503 (+)
G232659 NA other upstream 1163240 6374850 ~ 6375894 (+)
CI01000054_06305908_06312122 NA other upstream 1232274 6305908 ~ 6312163 (+)
G232558 NA other upstream 1497271 5993660 ~ 6041863 (+)
CI01000054_05608892_05634793 RNF19B other upstream 1914459 5608457 ~ 5634804 (+)
G233024 NA other downstream 9128 7567523 ~ 7609893 (+)
G233306 NA other downstream 746204 8304599 ~ 8304949 (+)
CI01000054_08325126_08329621 HPCAL4, VSNL1, VSNL1.S other downstream 747542 8325126 ~ 8329716 (+)
G235560 NA other downstream 2829741 10388136 ~ 10392378 (+)
CI01000054_11564820_11568338 S100V2 other downstream 4006581 11564820 ~ 11568999 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_014898 zbtb10 coding NC_007130.7 CM002903.2 31878454 ~ 31900893 (-)
bowfin (Amia calva) AMCG00021794 NA coding CM030130.1 CM030130.1 30185320 ~ 30200518 (+)