Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU312875 |
| length | 3548 |
| RNA type | TUCP |
| GC content | 0.39 |
| exon number | 1 |
| gene id | CI01000069_03768812_03787588 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000069 |
| NCBI id | null |
| chromosome length | 5329268 |
| location | 3765673 ~ 3787588 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0005737 | cytoplasm | cellular_component |
| id | description |
|---|---|
| K08796 | BRSK; BR serine/threonine kinase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU313018 | lncRNA | downstream | 27984 | 3737472 ~ 3737689 (-) | True | G275921 |
| TU313017 | lncRNA | downstream | 28715 | 3736654 ~ 3736958 (-) | True | G275920 |
| TU312850 | lncRNA | downstream | 129410 | 3612753 ~ 3636263 (-) | True | G275754 |
| TU312924 | lncRNA | downstream | 132559 | 3614318 ~ 3633114 (-) | True | G275828 |
| TU312846 | lncRNA | downstream | 137919 | 3595721 ~ 3627754 (-) | True | G275750 |
| TU312852 | lncRNA | upstream | 22369 | 3791589 ~ 3796952 (-) | True | G275756 |
| TU312886 | lncRNA | upstream | 54172 | 3823392 ~ 3826580 (-) | True | G275790 |
| TU312869 | lncRNA | upstream | 70014 | 3839234 ~ 3843586 (-) | True | G275773 |
| TU312923 | lncRNA | upstream | 79361 | 3848581 ~ 3848979 (-) | True | G275827 |
| TU313043 | lncRNA | upstream | 131685 | 3900905 ~ 3901166 (-) | True | G275946 |
| CI01000069_03739653_03764284.mRNA | mRNA | downstream | 1389 | 3738450 ~ 3764284 (-) | True | CI01000069_03739653_03764284 |
| CI01000069_03721128_03722393.mRNA | mRNA | downstream | 43280 | 3720944 ~ 3722393 (-) | True | CI01000069_03721128_03722393 |
| CI01000069_03678617_03697993.mRNA | mRNA | downstream | 66917 | 3678298 ~ 3698756 (-) | True | CI01000069_03678617_03697993 |
| CI01000069_03670799_03677837.mRNA | mRNA | downstream | 87830 | 3670271 ~ 3677843 (-) | True | CI01000069_03670799_03677837 |
| CI01000069_03667639_03669979.mRNA | mRNA | downstream | 95694 | 3667620 ~ 3669979 (-) | True | CI01000069_03667639_03669979 |
| CI01000069_03804630_03807180.mRNA | mRNA | upstream | 35410 | 3804630 ~ 3807180 (-) | False | CI01000069_03804630_03807180 |
| CI01000069_03871972_03884153.mRNA | mRNA | upstream | 102705 | 3871925 ~ 3884153 (-) | True | CI01000069_03871972_03884153 |
| CI01000069_03939251_03942780.mRNA | mRNA | upstream | 169984 | 3939204 ~ 3943095 (-) | True | CI01000069_03939251_03942780 |
| CI01000069_03972492_03982847.mRNA | mRNA | upstream | 202870 | 3972090 ~ 3982957 (-) | True | CI01000069_03972492_03982847 |
| CI01000069_03986480_03988243.mRNA | mRNA | upstream | 215957 | 3985177 ~ 3988612 (-) | True | CI01000069_03986480_03988243 |
| TU312899 | other | downstream | 189338 | 3563293 ~ 3576335 (-) | True | CI01000069_03571631_03573352 |
| TU312851 | other | downstream | 339299 | 3426149 ~ 3426374 (-) | True | G275755 |
| TU312791 | other | downstream | 687505 | 2992504 ~ 3078168 (-) | True | G275699 |
| TU312760 | other | downstream | 765240 | 2989026 ~ 2991817 (-) | True | G275668 |
| TU312711 | other | downstream | 1135357 | 2621752 ~ 2630316 (-) | True | G275624 |
| TU312842 | other | upstream | 35396 | 3805663 ~ 3805758 (-) | True | G275746 |
| TU313201 | other | upstream | 1170301 | 4942073 ~ 4942199 (-) | True | G276079 |
| TU313215 | other | upstream | 1200075 | 4985966 ~ 4986424 (-) | True | CI01000069_04985959_04986408 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00052719 | True | 3076 | lncRNA | 0.40 | 2 | NC_007114.7 | 32293773 ~ 32297003 (+) |
