RNA id: TU346007



Basic Information


Item Value
RNA id TU346007
length 245
lncRNA type inter_gene
GC content 0.34
exon number 1
gene id G304512
representative True

Chromosome Information


Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 1548238 ~ 1548482 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ATTATTAAAAAAGAGAATTAGTCAATTACAGGCCAATCTCGAATCTACCTTTTCTGTCAAAGATACTAGAAAAGGCAGTATCCTCACAACTATGTTCCTTTTTAGAAAGAAATGGTATCTGTGAGGATTTCCAGTCAGGATTTAGACCGTACCATAGTACTGAGACTGCTCTCATTAAAGTTACAAATGATTTGCTCTTATCATCAGATCGTGGTTGTATTTCTCTATTAGTGTTAGTAGATTTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU345948 lncRNA downstream 66326 1472008 ~ 1481912 (-) True G304457
TU345978 lncRNA downstream 124447 1423589 ~ 1423791 (-) True G304487
TU345946 lncRNA downstream 201350 1346329 ~ 1346888 (-) True G304455
TU345975 lncRNA downstream 202625 1345293 ~ 1345613 (-) True G304484
TU345972 lncRNA downstream 258461 1289439 ~ 1289777 (-) True G304481
TU346013 lncRNA upstream 6916 1555398 ~ 1555698 (-) True G304518
TU346015 lncRNA upstream 62598 1611080 ~ 1611355 (-) True G304520
TU346019 lncRNA upstream 80602 1629084 ~ 1629384 (-) True G304524
TU346039 lncRNA upstream 147326 1695808 ~ 1696381 (-) True G304544
TU346055 lncRNA upstream 169658 1718140 ~ 1718373 (-) True G304560
CI01000092_01488880_01522758.mRNA mRNA downstream 25480 1488880 ~ 1522758 (-) True CI01000092_01488880_01522758
CI01000092_01451469_01485752.mRNA mRNA downstream 62486 1451469 ~ 1485752 (-) True CI01000092_01451469_01485752
CI01000092_01352766_01386659.mRNA mRNA downstream 161579 1352745 ~ 1386659 (-) True CI01000092_01352766_01386659
CI01000092_01317932_01336911.mRNA mRNA downstream 209692 1317774 ~ 1338546 (-) True CI01000092_01317932_01336911
CI01000092_01307631_01315805.mRNA mRNA downstream 232433 1307315 ~ 1315805 (-) True CI01000092_01307631_01315805
CI01000092_01562366_01575276.mRNA mRNA upstream 13566 1562048 ~ 1575276 (-) True CI01000092_01562366_01575276
CI01000092_01588502_01599337.mRNA mRNA upstream 39991 1588473 ~ 1599337 (-) True CI01000092_01588502_01599337
CI01000092_01802304_01802591.mRNA mRNA upstream 252313 1800795 ~ 1804239 (-) True CI01000092_01802304_01802591
CI01000092_01866991_01869504.mRNA mRNA upstream 318419 1866901 ~ 1869504 (-) False CI01000092_01866991_01869504
CI01000092_01908289_01908682.mRNA mRNA upstream 358829 1907311 ~ 1908691 (-) True CI01000092_01908289_01908682
TU345950 other downstream 315946 1231900 ~ 1232292 (-) True G304459
TU345834 other downstream 451320 1086662 ~ 1096918 (-) True CI01000092_01086701_01097333
TU345840 other downstream 489318 1058367 ~ 1058920 (-) False G304369
TU345843 other downstream 489374 1058325 ~ 1058864 (-) False G304369
TU347441 other upstream 1176112 2724594 ~ 2724944 (-) True G305772
TU347691 other upstream 2129392 3677874 ~ 3679488 (-) True G306014
TU348466 other upstream 2947932 4496414 ~ 4505953 (-) True G306679
TU348596 other upstream 3255913 4804395 ~ 4865973 (-) True G306792
TU348717 other upstream 3605186 5153668 ~ 5154133 (-) True G306902

Expression Profile