RNA id: TU346251



Basic Information


Item Value
RNA id TU346251
length 225
lncRNA type inter_gene
GC content 0.30
exon number 1
gene id G304741
representative True

Chromosome Information


Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 1857687 ~ 1857911 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TTGCAATTACTGAATTAGTGTGAGGGACATCTGATTAATAGGAAAATGTTGATTTTATCACAAATACATTTTATAATAATATTCAGAGAGCTCCCATAGTGTTCATAACTTAAAATAATGACCAACAATAATAGGGATTTGATGCCTGAGATGGGAAAATATGTTTTTCTGGAAGTTAAATATGTCATTAATGTTGTGGGGTGTTCAGAAAAGTAATACATTTTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU346059 lncRNA downstream 135123 1722334 ~ 1722564 (-) True G304564
TU346055 lncRNA downstream 139314 1718140 ~ 1718373 (-) True G304560
TU346039 lncRNA downstream 161306 1695808 ~ 1696381 (-) True G304544
TU346019 lncRNA downstream 228303 1629084 ~ 1629384 (-) True G304524
TU346015 lncRNA downstream 246332 1611080 ~ 1611355 (-) True G304520
TU346252 lncRNA upstream 421 1858332 ~ 1858539 (-) True G304742
TU346254 lncRNA upstream 3948 1861859 ~ 1862148 (-) True G304744
TU346256 lncRNA upstream 5625 1863536 ~ 1863827 (-) True G304746
TU346235 lncRNA upstream 9094 1870016 ~ 1870055 (-) True G304725
TU346234 lncRNA upstream 23847 1881758 ~ 1883473 (-) True G304724
CI01000092_01802304_01802591.mRNA mRNA downstream 53448 1800795 ~ 1804239 (-) True CI01000092_01802304_01802591
CI01000092_01588502_01599337.mRNA mRNA downstream 258350 1588473 ~ 1599337 (-) True CI01000092_01588502_01599337
CI01000092_01562366_01575276.mRNA mRNA downstream 282411 1562048 ~ 1575276 (-) True CI01000092_01562366_01575276
CI01000092_01488880_01522758.mRNA mRNA downstream 334929 1488880 ~ 1522758 (-) True CI01000092_01488880_01522758
CI01000092_01451469_01485752.mRNA mRNA downstream 371935 1451469 ~ 1485752 (-) True CI01000092_01451469_01485752
CI01000092_01866991_01869504.mRNA mRNA upstream 8990 1866901 ~ 1869504 (-) False CI01000092_01866991_01869504
CI01000092_01908289_01908682.mRNA mRNA upstream 49400 1907311 ~ 1908691 (-) True CI01000092_01908289_01908682
CI01000092_01964262_01964863.mRNA mRNA upstream 106168 1964079 ~ 1964863 (-) False CI01000092_01964262_01964863
CI01000092_01981235_01981861.mRNA mRNA upstream 122552 1980463 ~ 1981861 (-) True CI01000092_01981235_01981861
CI01000092_02026073_02027161.mRNA mRNA upstream 168151 2026062 ~ 2027525 (-) True CI01000092_02026073_02027161
TU345950 other downstream 625395 1231900 ~ 1232292 (-) True G304459
TU345834 other downstream 760769 1086662 ~ 1096918 (-) True CI01000092_01086701_01097333
TU345840 other downstream 798767 1058367 ~ 1058920 (-) False G304369
TU345843 other downstream 798823 1058325 ~ 1058864 (-) False G304369
TU347441 other upstream 866683 2724594 ~ 2724944 (-) True G305772
TU347691 other upstream 1819963 3677874 ~ 3679488 (-) True G306014
TU348466 other upstream 2638503 4496414 ~ 4505953 (-) True G306679
TU348596 other upstream 2946484 4804395 ~ 4865973 (-) True G306792
TU348717 other upstream 3295757 5153668 ~ 5154133 (-) True G306902

Expression Profile