Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU347492 |
| length | 23998 |
| lncRNA type | sense_over |
| GC content | 0.38 |
| exon number | 3 |
| gene id | G305817 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000092 |
| NCBI id | null |
| chromosome length | 5370156 |
| location | 3226834 ~ 3275358 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU347488 | lncRNA | downstream | 143188 | 3051910 ~ 3083646 (-) | True | G305813 |
| TU347573 | lncRNA | downstream | 181881 | 3044742 ~ 3044953 (-) | True | G305898 |
| TU347572 | lncRNA | downstream | 182336 | 3044240 ~ 3044498 (-) | True | G305897 |
| TU347571 | lncRNA | downstream | 184633 | 3041986 ~ 3042201 (-) | True | G305896 |
| TU347569 | lncRNA | downstream | 185540 | 3041068 ~ 3041294 (-) | True | G305894 |
| TU347595 | lncRNA | upstream | 31914 | 3307272 ~ 3307547 (-) | True | CI01000092_03307794_03308422 |
| TU347598 | lncRNA | upstream | 34735 | 3310093 ~ 3310299 (-) | True | G305922 |
| TU347486 | lncRNA | upstream | 81488 | 3356846 ~ 3357075 (-) | True | G305811 |
| TU347480 | lncRNA | upstream | 82009 | 3357367 ~ 3359859 (-) | True | G305805 |
| TU347493 | lncRNA | upstream | 88260 | 3363618 ~ 3364509 (-) | True | G305818 |
| CI01000092_03224848_03225687.mRNA | mRNA | downstream | 1039 | 3224461 ~ 3225795 (-) | True | CI01000092_03224848_03225687 |
| CI01000092_03103762_03184280.mRNA | mRNA | downstream | 42554 | 3103105 ~ 3184280 (-) | True | CI01000092_03103762_03184280 |
| CI01000092_03086245_03088783.mRNA | mRNA | downstream | 137716 | 3086208 ~ 3089118 (-) | True | CI01000092_03086245_03088783 |
| CI01000092_02933754_02957495.mRNA | mRNA | downstream | 269197 | 2933754 ~ 2957637 (-) | False | CI01000092_02933754_02957495 |
| CI01000092_02902889_02909457.mRNA | mRNA | downstream | 317345 | 2902812 ~ 2909489 (-) | True | CI01000092_02902889_02909457 |
| CI01000092_03307794_03308422.mRNA | mRNA | upstream | 31844 | 3307202 ~ 3308514 (-) | False | CI01000092_03307794_03308422 |
| CI01000092_03365550_03416277.mRNA | mRNA | upstream | 89649 | 3365007 ~ 3416277 (-) | True | CI01000092_03365550_03416277 |
| CI01000092_03418301_03428309.mRNA | mRNA | upstream | 142943 | 3418301 ~ 3428309 (-) | True | CI01000092_03418301_03428309 |
| CI01000092_03600064_03611514.mRNA | mRNA | upstream | 324556 | 3599914 ~ 3612148 (-) | True | CI01000092_03600064_03611514 |
| CI01000092_03614992_03615400.mRNA | mRNA | upstream | 339079 | 3614437 ~ 3616983 (-) | True | CI01000092_03614992_03615400 |
| TU347441 | other | downstream | 501890 | 2724594 ~ 2724944 (-) | True | G305772 |
| TU345950 | other | downstream | 1994542 | 1231900 ~ 1232292 (-) | True | G304459 |
| TU345834 | other | downstream | 2129916 | 1086662 ~ 1096918 (-) | True | CI01000092_01086701_01097333 |
| TU345840 | other | downstream | 2167914 | 1058367 ~ 1058920 (-) | False | G304369 |
| TU347691 | other | upstream | 402516 | 3677874 ~ 3679488 (-) | True | G306014 |
| TU348466 | other | upstream | 1221056 | 4496414 ~ 4505953 (-) | True | G306679 |
| TU348596 | other | upstream | 1529037 | 4804395 ~ 4865973 (-) | True | G306792 |
| TU348717 | other | upstream | 1878310 | 5153668 ~ 5154133 (-) | True | G306902 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| eurasian perch (Perca fluviatilis) | TU95620 | False | 2411 | lncRNA | 0.42 | 1 | NC_053118.1 | 9123322 ~ 9125732 (+) |
