RNA id: TU349667


Basic Information

Item Value
RNA id TU349667
length 371
lncRNA type inter_gene
GC content 0.45
exon number 1
gene id G307715
representative True

Chromosome Information

Item Value
chromosome id CI01000093
NCBI id null
chromosome length 1475560
location 509761 ~ 510131 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

NNNNCCAATTGTGAACCCCACGAATGGAGCCTCCGCTCTGCCTCAGCAGAAGCGGGACCCGATCCGCGGGGAACACAGGAACACAGTGTCCTGAGAGTGAGTTTTTTACAATGCGCACAGACAGCTCCCTCAAGAGCTGCCTGGGCATGCTCAACTCCCATTCAACTGCTGTTTTTCGCCATAATACGTGTCTTTTTTATATATAAATATATGGATTGGTGTGAGATACTCTTGTCCTCAGACGAAGAGATTGTGACTTGTTTATGTAATAAGACAAACAACACCAAATAAGACACACGATAACACAGAGCGCTTGCTGAAGACAACAGAAGCTAGCGTTCTTTGTTCTGGGTATGCTTTATAGTTTCCTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU349595 lncRNA downstream 10555 495774 ~ 499206 (-) False G307665
TU349594 lncRNA downstream 10555 496314 ~ 499206 (-) True G307665
TU349487 lncRNA downstream 83328 425760 ~ 426433 (-) True G307568
TU349603 lncRNA downstream 100618 408793 ~ 409143 (-) True G307671
TU349605 lncRNA downstream 105515 403800 ~ 404246 (-) True G307673
TU349669 lncRNA upstream 1438 511569 ~ 511780 (-) True G307717
TU349670 lncRNA upstream 4939 515070 ~ 515432 (-) True G307718
TU349462 lncRNA upstream 8786 518917 ~ 525677 (-) True G307543
TU349455 lncRNA upstream 15602 525733 ~ 528396 (-) True G307540
TU349471 lncRNA upstream 174275 684406 ~ 715636 (-) True G307552
CI01000093_00441786_00443029.mRNA mRNA downstream 66171 441368 ~ 443590 (-) True CI01000093_00441786_00443029
CI01000093_00372074_00372877.mRNA mRNA downstream 136736 371795 ~ 373025 (-) True CI01000093_00372074_00372877
CI01000093_00224221_00233968.mRNA mRNA downstream 273319 223865 ~ 236442 (-) True CI01000093_00224221_00233968
CI01000093_00044285_00045637.mRNA mRNA downstream 464109 44016 ~ 45652 (-) False CI01000093_00044285_00045637
CI01000093_00021721_00029528.mRNA mRNA downstream 480233 21721 ~ 29528 (-) True CI01000093_00021721_00029528
CI01000093_00601248_00607534.mRNA mRNA upstream 90954 601085 ~ 607729 (-) True CI01000093_00601248_00607534
CI01000093_00633602_00642455.mRNA mRNA upstream 121495 631626 ~ 642522 (-) True CI01000093_00633602_00642455
CI01000093_00643216_00644177.mRNA mRNA upstream 132844 642975 ~ 644177 (-) True CI01000093_00643216_00644177
CI01000093_00693070_00700737.mRNA mRNA upstream 181938 692069 ~ 703605 (-) False CI01000093_00693070_00700737
CI01000093_00716586_00720543.mRNA mRNA upstream 206438 716569 ~ 720866 (-) True CI01000093_00716586_00720543
TU349703 other upstream 557888 1073022 ~ 1073753 (-) True G307751

Expression Profile