RNA id: TCONS_00017874


Basic Information

Item Value
RNA id TCONS_00017874
length 117
RNA type rRNA
GC content 0.51
exon number 1
gene id XLOC_009071
representative True

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 14315354 ~ 14315470 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TACTGCATAGCTTGCTCTCtgtaactctcacatggtcgcccacttaagctaagcagggctgtgcctggtgaGTACCtagatggaagaccacatgggaaagctaggttgctgccgaaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000179531

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00017870 lncRNA downstream 67307 14246090 ~ 14248047 (-) True XLOC_009069
TCONS_00019132 lncRNA downstream 83284 14229248 ~ 14232070 (-) True XLOC_009068
TCONS_00019131 lncRNA downstream 251004 14062613 ~ 14064350 (-) True XLOC_009063
TCONS_00017856 lncRNA downstream 251052 14062613 ~ 14064302 (-) False XLOC_009063
TCONS_00019129 lncRNA downstream 1106942 13206185 ~ 13208412 (-) False XLOC_009060
TCONS_00017885 lncRNA upstream 364585 14680055 ~ 14696775 (-) True XLOC_009077
TCONS_00017888 lncRNA upstream 567821 14883291 ~ 14884061 (-) True XLOC_009080
TCONS_00019133 lncRNA upstream 712742 15028212 ~ 15030391 (-) True XLOC_009081
TCONS_00017892 lncRNA upstream 908861 15224331 ~ 15227050 (-) True XLOC_009082
TCONS_00018816 lncRNA upstream 988257 15303727 ~ 15307733 (-) False XLOC_009083
TCONS_00017869 mRNA downstream 102577 14205830 ~ 14212777 (-) True XLOC_009067
TCONS_00017868 mRNA downstream 104972 14203675 ~ 14210382 (-) False XLOC_009067
TCONS_00017862 mRNA downstream 121146 14163193 ~ 14194208 (-) False XLOC_009066
TCONS_00017864 mRNA downstream 121146 14177861 ~ 14194208 (-) False XLOC_009066
TCONS_00017863 mRNA downstream 121146 14177861 ~ 14194208 (-) False XLOC_009066
TCONS_00017875 mRNA upstream 120689 14436159 ~ 14552101 (-) False XLOC_009072
TCONS_00017876 mRNA upstream 120696 14436166 ~ 14467394 (-) False XLOC_009072
TCONS_00017877 mRNA upstream 121143 14436613 ~ 14469704 (-) False XLOC_009072
TCONS_00017878 mRNA upstream 121143 14436613 ~ 14486534 (-) True XLOC_009072
TCONS_00017879 mRNA upstream 238828 14554298 ~ 14589677 (-) True XLOC_009073
TCONS_00017866 other downstream 121458 14185388 ~ 14193896 (-) False XLOC_009066
TCONS_00017858 other downstream 232241 14076539 ~ 14083113 (-) False XLOC_009064
TCONS_00017854 other downstream 490750 13824472 ~ 13824604 (-) True XLOC_009061
TCONS_00017830 other downstream 2339094 11976143 ~ 11976260 (-) True XLOC_009050
TCONS_00017819 other downstream 4129185 10186054 ~ 10186169 (-) True XLOC_009039
TCONS_00017882 other upstream 320199 14635669 ~ 14635785 (-) True XLOC_009076
TCONS_00017891 other upstream 906013 15221483 ~ 15224702 (-) False XLOC_009082
TCONS_00017896 other upstream 1068428 15383898 ~ 15383983 (-) True XLOC_009086
TCONS_00017917 other upstream 1643906 15959376 ~ 15960468 (-) True XLOC_009094
TCONS_00017936 other upstream 2478641 16794111 ~ 16872600 (-) True XLOC_009108