RNA id: TCONS_00018156


Basic Information

Item Value
RNA id TCONS_00018156
length 2106
RNA type mRNA
GC content 0.49
exon number 6
gene id XLOC_009239
representative True

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 25080041 ~ 25083200 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TGGAGTTTTCAGTTGATCGTGATATAACAAATATTCAGTTCGCCGCTGATAACAATTCTCTCGAGTTTGGAAAGAAACATAGAACAATGGGACGAGTTAGAAAGAGAGTAAAACAGTTCTGTAACTGGGCCTCTCGGAAATCTGGGAAAGTCCAGCAGAACCAGTGCACATCCGAGGGCGACCTCGAGCACCGGAGATGTTCTGATGACGAAGCCGGACCGAGCAACGCTACGTTCATCTCCCACATTCACACTGGAGCTGGTGTTTCACCAAGCCCAGCACCACAGACAAGAGAGAAGAAACTTAAGAGGCTCTGGAAATGGTTTTCTCGGAAATTCAAGAGAACTAGAACCAGAGCCCCACAGGGCCAGCTGAGCAGCCCACAGCCTCAGAGATCCCCTGACGGTGAAGCTGCGTGTGTGTCGCCGAGGACAGTTCATGACGAGCGGGTTAACAGGCGCGTGTCTATCCAGACCCCTGTGAAGACCCCGTCAACAGAAACTGAACGGCACGACGACACTGAATGCTGGGACTTTTCTGTATCTTCTCTTAGCACTGCGGGAAACAGCGAATCCGACCGCGCTTCAGTGCACAGCTGGCACTCGTGTGCGTCTTCGCTTGGCACGCCGGTTATCAGTGAATCTGACCGCGCATCAGTGTTAAGTTGGCACTCTTGTGCGTCTTCGCTTGGTACCGCGGGGATCAGCGAATCTGACCGCGCTTCAGTGCACAGTAGGCACCCTTGTGAGTCTTCGCTGACCGCTGAACACCACAACGATGAGGAAAACGCTTCCAGTGAGGACTCCAGCGTGTCCGAGGACAGCACATCTTCCTCATCGGATTTTTGGAAAACAGAACAGGAAACCACATTTAACTGGGAAGGAAATACAGgTAGAATCTCCCAGGACTATAAAATCCATCACTTGATTGGTCAGGGATCAACAGGAGTCATCTATGATGGAATTCGTCTGTCGGATTGCCGAATGGTGGATATCAAATGCGTGAAGAAGAGCAAATCAATGGAAAGGATCACGATTGAACCATCTGACAAGACTGTTCCACGAGAGGTCGGTTTGATGATTATGATGAGCAGAGGTCCGAAGGTTCCTCAAGTAATACAGCTGCTGGACTGGTATGAGGCACCAGACCGATACATACTGGTGCTGGAGCATCCCAAATCAGCTGTGAGCCTGGACCAGTTTGTATCCTCTTGTGGGAACAAAATCAGCGAAGCGAAAGCACGAGTGGTGATGCACCAGGTGATCACTGCTGCCAACGCATGCTGCGAAAGGGGAGTCTACAATAACATCAAGCTGGAGAGCCTGCTCATCAACCCCCACACCTTGCAGGTCAAACTGATGGACTTTGGCACGGGAAGCCTCATTAAGGACTCTGGCTATACAAAATTTTGGGGCTCAATAGCTTGTATTCCCCCGGAGTTCTATCAGAAGGGAAGGTTCCACGCCAAACCTGCAATCGTGTACTCTTTAGGCAAACTGTTGTTCAGGATGCTGTGTGGACACTACCCTCATATGGAGCTCCACAAGATTGTCAAAAGAACCTGGCAGCCTGAAGACCTATCCAAAGAAGCCGTAGATCTGATCTGCTCGTGTCTGCAGACTAAGCCAGACAAGCGGCCTCTACTTGACGAGATCCTTCACCAGAGATGGTTCCAGGTCTTCATCCTGAAGCCAAACAACAGACGAAAAGATTAAGATCAGAACATCCAGCCTCTTCATCCAGCCTCTTCATTCAGCCGTCAACACCAAACTTCTCCTCTTCATCGATCCACTAACACCGAACTCCTCCTCTTCATCCAGCCACTAACACTAAGCTCCTCTTTTATATTCAGCCAGAAACTCCGTCAAGCCACAAACATGGGGCAGTTTGTGGCTTTACGAAGAGAAAAAGCTGAATGGGGCTGGTGTTTGTGGTTGCGTGGAAAGGAGGAGCTGTTTGGGGCCGGTGTTTGTGGTTGATAAAGAGGAGGAGCTGAAGGGGGCCGGCGTTTGTATCTggatgaagagaagatttttggtttatttttggagattgtaaataaatgcTTGTTCTGTatgtaatgaataaaaatgaatacttTTCACA

Function

GO:

id name namespace
GO:0043066 negative regulation of apoptotic process biological_process
GO:0006468 protein phosphorylation biological_process
GO:0007346 regulation of mitotic cell cycle biological_process
GO:0046777 protein autophosphorylation biological_process
GO:0005737 cytoplasm cellular_component
GO:0005524 ATP binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-131119-3 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

Ensembl:

ensembl_id ENSDART00000156053

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00018824 lncRNA downstream 105929 24968092 ~ 24974112 (-) True XLOC_009236
TCONS_00019159 lncRNA downstream 152948 24901551 ~ 24927093 (-) False XLOC_009234
TCONS_00018168 lncRNA upstream 131928 25215128 ~ 25229469 (-) False XLOC_009244
TCONS_00019163 lncRNA upstream 615612 25698812 ~ 25760624 (-) False XLOC_009254
TCONS_00019164 lncRNA upstream 615612 25698812 ~ 25876114 (-) False XLOC_009254
TCONS_00019165 lncRNA upstream 635544 25718744 ~ 25760609 (-) False XLOC_009254
TCONS_00018193 lncRNA upstream 635544 25718744 ~ 25760634 (-) False XLOC_009254
TCONS_00018155 mRNA downstream 40958 25035947 ~ 25039083 (-) True XLOC_009238
TCONS_00018154 mRNA downstream 69641 25007209 ~ 25010400 (-) True XLOC_009237
TCONS_00018153 mRNA downstream 119260 24950682 ~ 24960781 (-) True XLOC_009235
TCONS_00018152 mRNA downstream 119311 24946321 ~ 24960730 (-) False XLOC_009235
TCONS_00018150 mRNA downstream 195257 24878480 ~ 24884784 (-) True XLOC_009233
TCONS_00018158 mRNA upstream 1740 25084940 ~ 25094026 (-) False XLOC_009240
TCONS_00018159 mRNA upstream 4005 25087205 ~ 25093680 (-) True XLOC_009240
TCONS_00018160 mRNA upstream 10091 25093291 ~ 25099233 (-) False XLOC_009241
TCONS_00018161 mRNA upstream 12832 25096032 ~ 25099679 (-) True XLOC_009241
TCONS_00018162 mRNA upstream 17526 25100726 ~ 25153352 (-) False XLOC_009242
TCONS_00018151 other downstream 171562 24908394 ~ 24908479 (-) True XLOC_009234
TCONS_00018142 other downstream 920974 24158953 ~ 24159067 (-) True XLOC_009227
TCONS_00018102 other downstream 2124909 22955017 ~ 22955132 (-) True XLOC_009204
TCONS_00018101 other downstream 2359160 22720765 ~ 22720881 (-) True XLOC_009203
TCONS_00018099 other downstream 2819044 22260881 ~ 22260997 (-) True XLOC_009200
TCONS_00018157 other upstream 1621 25084821 ~ 25093717 (-) False XLOC_009240
TCONS_00018169 other upstream 155289 25238489 ~ 25268641 (-) False XLOC_009244
TCONS_00018173 other upstream 195645 25278845 ~ 25284045 (-) True XLOC_009245
TCONS_00018187 other upstream 494988 25578188 ~ 25579500 (-) False XLOC_009252
TCONS_00018188 other upstream 495275 25578475 ~ 25584862 (-) True XLOC_009252

Expression Profile

//