Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00021955 |
| length | 3207 |
| lncRNA type | antisense_over |
| GC content | 0.34 |
| exon number | 2 |
| gene id | XLOC_009994 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007127.7 |
| NCBI id | CM002900.2 |
| chromosome length | 55266484 |
| location | 28660395 ~ 28667333 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0022402 | cell cycle process | biological_process |
| GO:0098813 | nuclear chromosome segregation | biological_process |
| GO:0051726 | regulation of cell cycle | biological_process |
| GO:0000079 | regulation of cyclin-dependent protein serine/threonine kinase activity | biological_process |
| GO:0090307 | mitotic spindle assembly | biological_process |
| GO:0044770 | cell cycle phase transition | biological_process |
| GO:0044772 | mitotic cell cycle phase transition | biological_process |
| GO:0051225 | spindle assembly | biological_process |
| GO:1904029 | regulation of cyclin-dependent protein kinase activity | biological_process |
| GO:0048285 | organelle fission | biological_process |
| GO:0045859 | regulation of protein kinase activity | biological_process |
| GO:0007049 | cell cycle | biological_process |
| GO:0007051 | spindle organization | biological_process |
| GO:0007059 | chromosome segregation | biological_process |
| GO:0051301 | cell division | biological_process |
| GO:1903047 | mitotic cell cycle process | biological_process |
| GO:0010564 | regulation of cell cycle process | biological_process |
| GO:0000278 | mitotic cell cycle | biological_process |
| GO:0000280 | nuclear division | biological_process |
| GO:0000307 | cyclin-dependent protein kinase holoenzyme complex | cellular_component |
| GO:0072686 | mitotic spindle | cellular_component |
| GO:0044424 | obsolete intracellular part | cellular_component |
| GO:0044430 | obsolete cytoskeletal part | cellular_component |
| GO:0005815 | microtubule organizing center | cellular_component |
| GO:0005819 | spindle | cellular_component |
| GO:0015630 | microtubule cytoskeleton | cellular_component |
| GO:0005622 | intracellular anatomical structure | cellular_component |
| GO:0005634 | nucleus | cellular_component |
| GO:0043226 | organelle | cellular_component |
| GO:0043227 | membrane-bounded organelle | cellular_component |
| GO:0043229 | intracellular organelle | cellular_component |
| GO:0043231 | intracellular membrane-bounded organelle | cellular_component |
| GO:0019887 | protein kinase regulator activity | molecular_function |
| GO:0016538 | cyclin-dependent protein serine/threonine kinase regulator activity | molecular_function |
| GO:0019207 | kinase regulator activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00021953 | lncRNA | upstream | 389008 | 28270015 ~ 28271395 (+) | False | XLOC_009987 |
| TCONS_00021952 | lncRNA | upstream | 610375 | 28049554 ~ 28050028 (+) | True | XLOC_009986 |
| TCONS_00021720 | lncRNA | upstream | 787036 | 27839927 ~ 27873367 (+) | True | XLOC_009984 |
| TCONS_00019876 | lncRNA | upstream | 1089052 | 27569837 ~ 27571351 (+) | True | XLOC_009980 |
| TCONS_00019874 | lncRNA | upstream | 1103614 | 27555031 ~ 27556789 (+) | True | XLOC_009979 |
| TCONS_00019908 | lncRNA | downstream | 361441 | 29025301 ~ 29029007 (+) | False | XLOC_010003 |
| TCONS_00019909 | lncRNA | downstream | 361443 | 29025303 ~ 29025882 (+) | True | XLOC_010003 |
| TCONS_00021956 | lncRNA | downstream | 547502 | 29211362 ~ 29227112 (+) | False | XLOC_010005 |
| TCONS_00019911 | lncRNA | downstream | 548561 | 29212421 ~ 29227002 (+) | False | XLOC_010005 |
| TCONS_00021957 | lncRNA | downstream | 548589 | 29212449 ~ 29227112 (+) | False | XLOC_010005 |
| TCONS_00019892 | mRNA | upstream | 32835 | 28601974 ~ 28627568 (+) | False | XLOC_009993 |
| TCONS_00019893 | mRNA | upstream | 34120 | 28602423 ~ 28626283 (+) | True | XLOC_009993 |
| TCONS_00019890 | mRNA | upstream | 61075 | 28596555 ~ 28599328 (+) | False | XLOC_009992 |
| TCONS_00019891 | mRNA | upstream | 61879 | 28596568 ~ 28598524 (+) | True | XLOC_009992 |
| TCONS_00019888 | mRNA | upstream | 68862 | 28578352 ~ 28591541 (+) | False | XLOC_009991 |
| TCONS_00019894 | mRNA | downstream | 63523 | 28727383 ~ 28754071 (+) | True | XLOC_009995 |
| TCONS_00019895 | mRNA | downstream | 64487 | 28728347 ~ 28737174 (+) | True | XLOC_009996 |
| TCONS_00019896 | mRNA | downstream | 90543 | 28754403 ~ 28760006 (+) | True | XLOC_009997 |
| TCONS_00019897 | mRNA | downstream | 100157 | 28764017 ~ 28790417 (+) | True | XLOC_009998 |
| TCONS_00019898 | mRNA | downstream | 128298 | 28792158 ~ 28796865 (+) | False | XLOC_009999 |
| TCONS_00019885 | other | upstream | 272240 | 28388046 ~ 28388163 (+) | True | XLOC_009989 |
| TCONS_00019873 | other | upstream | 1105163 | 27549842 ~ 27555240 (+) | False | XLOC_009979 |
| TCONS_00019869 | other | upstream | 1105301 | 27543582 ~ 27555102 (+) | False | XLOC_009979 |
| TCONS_00019867 | other | upstream | 1105354 | 27543497 ~ 27555049 (+) | False | XLOC_009979 |
| TCONS_00019905 | other | downstream | 353076 | 29016936 ~ 29019138 (+) | True | XLOC_010002 |
| TCONS_00019912 | other | downstream | 552414 | 29216274 ~ 29216360 (+) | True | XLOC_010005 |
| TCONS_00019938 | other | downstream | 1338892 | 30002752 ~ 30036693 (+) | False | XLOC_010020 |
| TCONS_00019939 | other | downstream | 1416683 | 30080543 ~ 30080661 (+) | True | XLOC_010021 |
| TCONS_00019951 | other | downstream | 2306641 | 30970501 ~ 30971157 (+) | True | XLOC_010029 |
