RNA id: CI01000325_10223671_10247196.mRNA



Basic Information


Item Value
RNA id CI01000325_10223671_10247196.mRNA
length 6190
RNA type mRNA
GC content 0.44
exon number 14
gene id CI01000325_10223671_10247196
representative True

Chromosome Information


Item Value
chromosome id CI01000325
NCBI id null
chromosome length 10587162
location 10222845 ~ 10247532 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ACAATTTACCTAAGGAAAGTTAACAACGAGTAGAATATTAAAAACAACGGTAACTTAAATAACAGATAGGAGGGTGTGATTTAATTCAAGGACTTTTTGTATTTGCGTAAATAGAAATCAAATATTCTCTGCTACTCACCGGATCAAGTTCTCCAACAACATAAAGGCACGGCGCGCGAAATCACAGCATGTGGCACGAGGACATCACGATTTTCTGAACCAAGTAAAGTCAGCTTTTAGCGTGAAATACAATTTTTTTTTTTTTTTTTTTTTTTAAACGAATGGAAACTTGTTGCGAAGAATAGGAGCCTAATTGAGCGTCTATTCATTCAGAACATGAAGAATCAAACAGAATATTGTGAAACAACAGGCAGTCAGCGGTTCATGATGACCAACGTTAAAATGGGTCCCGTGTTCAAGGGTCATACAGCGCAGAAGGAGCGTCCCTCGCCCGAAGGCGCTGGCTCTTCAGCCTATGATTCCCATGCAGCACCTTGGACAGGGTGCGCGGGCTCACTCCCGACACCCCTCACTCACTCTCTCCTACGGTCAAAATGGTCCAAAGAACTGTTAAACGGTTACCCTCCTGAATACAACTCCATCAAGTCCACTGGGACAAAAAGAGAGACGTTATTCGACACAGGACATTTGTGCAAAAAGTGCATCTCTCATTTCAACGTCTTCAAAGGGGAAGCATTAAAACAAGTAATTGACAGAAACCTTTCGACCAAAGATCCCAAAGTCTTCATTCATCTTTATGAGAGCATGAAACCACCTGCTAGTACTGTAGATGCCTGGGGCAACGTGGACGGACGCTGTGGCGTCTGCTCCACTCACTTTAGCCAGTTGAAGCAGGAGGCTATCCGCACGATCCTCACCCAGGACCGGGCCATATGGGCTCCACCTACTACTGCCAACATCTCATCCACAAGCCTTGACTCAGGCTCGCAAACGCTCCCCAGAACCTCAAGCCACCGATCTGTTGTCTCAGACCCCCATCAGAGGCCCAGCAATGCAGGACCGGAATGCTGGATTAAAGGACGTCAACATTTAGAGGCCCTGTGGCCCCTGTCCTCATGCAAAGGAATCAATTCAATGTCTCAAAAGAGTCCTTTACATGCAGGAAAGGTGTTTGAGAAGGAGAATGTGACCTCAACAGCACTATGCAACTACGGCGCCTCACGGCCATCCCGTTCTTCCAGTATGTCCTCTCTGCTTCCTGCAGGAACCTCTGCTGCCTTGTCTTTCTTTGTCAGGGCTGCACAAAAGCTGAACGGAATGGTTAGAAGAGGGAGGCCGTTCTCAGAAAGTGGTGCTTCCCAACATCTGACAAACTTCAGTAGCCTCATGCAGAAGTCTCCTCCTCCAGTACCAGCCAGCATTTTTCAAGCTGCTAGTAAGAGCAAGGAAACACCTGGGATGGGGAAGGTTAAAGTGATGCTGCGAGTCTGTTCGGTTCCTGAGTCAGACCCCTCCCAGTCCTATTCTTTCAAACTGGACCAGCACAAGAAACAGATCACAGTGCTGAATGTACCGACCTTCACCCCTCAGAGACAGACTGCTGGCACTACAGTCTCCTCAAAGACCTTCACCTTTGATGCTGCCTTTGGCCACGATTCAACCCAGGCTGAAGTTTGTGAGAACAGCTTGTGTGAGGTGCTTCAGTGTGTGGTGGCAGGGGCTGATGGTTGCATCCTAAGCTTTGGTCAATCCAGTGTGGGAATGTCTTACACAATGATTGGCCACGATGGTTGTACTCAAAGCCTTGGAGTTATTCCATGTGCTATCTCTTGGCTTTTCAAGCTCATTAACAGGAAGAAAGACAAGACATGGGCAAACATCACTGTTTCCGTGTCAGCTGTAGAGGTCTGTGGAGAAAACAATGCCATCAGGGATTTACTCTCTGATGTTGAGACGGGCAACTGCAAGGAGACCTATAAGCCAGATGCTTTCCTCAAAGAGGACCCCGTCTGTGGAATACAGGCAACTCTGCAACCACAGTGTGCTAAATGCTCCAACCCCGGAAAGAGCAGCTTTCCTATTAGATGCAGCTATCGCATCTCGCAGTGGGACTTTGGACAGTGGAGGGACACCGCTACACTGTTGTCACATGTTCTTCACCCTGCATTGAATGTAGATCAAAGCAAGCTGAGCCTGATCGATTTAGGGAGCTGTGTGGGGGAGAGGGATGAAAGCAACTGTGGAGTCTGCCTCGCTGAGCTTGGAAACTTTATCACAGCCAATCTCAACAGACATAAACACGTCACTAATAGTGATCCAGCATTTTACCCTGAGAGTGACAAGTCTTGTGATACCTTTATCTCTGTGGATCCTTCTGGCCTCCTAGATAAAGAGGTTACAAATAGAAGCAGAGAGGTTTTACCTATTATTCCATCCTTACTCAAGAGCAAATTAGAGTCCAAGAAGCTCTCGTTGATGAAGTTTTGTGAAATCTCTCCACCAATTGCCAATCGCATGAAGCAGATATCAAAAGAAAAGACTAAAGAAGAGTCAACTCCAACAATATTGCAAGATAAATCAGATTTTGAGTGTCTGAAGTGCAACACATTTGCAGAACTCCAGAATCGACTGGGAAACATAGACGGAACAGAGTTGGATCTATGCAAAGATCAGGAAGTGAACACTACGAATAAAGCACCTCACTTAAGCCAAACTGAAAAGAAATCTAATTCATTGGACATTCAAGCATCAAGCAAATCTGAAAGTACCAGACAAGGAAACTCATCAAAAACATTTGCCATCATTCACAACAGTGAGGAAATTCCAAGTTCTTCCGATTCACAGATTATTCAGACATGTCCGCCGCAGTTAGATGTCGTCAAACCAAGTGTTCCTTTGCTGTCTGGCCAATCTCCAAGCAAATCTAAGCTTCATAATAAAAAAATGGACGTAATGCCTACTTCACTATCTCTGAAATTGGAAGACCAAGGTAAGATAAGATTATCGGATTTCACAATGCAACCTGAGACACGAATTTCTCCCATCGGCAAGAGTTCTCCGAGATCTACCTCGTCCTCTTCTTTTTCATCATCACTATCTTCCAGTCTGAGCTCCCCACCAGCTGTTTCTACCTCTTTGAATGGAGATGTTCCACATTGTACAGCAAAGAACCAGCGAGAGATGAGGGCCACCATTACAGTGACCGTTCAGCAACCGCTCGATCTTAATGGACATGATGAGATTGTGTATACCGTGGTTGAGGAGGTTACAATAAATGGGGCCACTGAGCAAGGAAAGGCAAAAATATTAAGCATTCATGAGTCTCACTCTCTCCAGGCTTTAACGCCAGGAAGTCAGTCTGTAAGGATTATCGGCAGCATAGGTGAAGAACAAACAGCAAGTTTTTATAGTTCCACCTCTAATGCAAAAACTCCAGAGAATGAAGTCTCCATGGCCTCATCTGATGCAGCTGTACCACACACAAAAATCAATCCACATATTGACAAGGTAAGCAGCTTCCTTGATTCAAAAGACCTGCTGCAGCATGATAGTTGGTCTGACGTGCCGCTGACTGAAGATGTGAAGGAGATACCTAAAGAAGCCAATGCTAAACTTGACCCTCACTGTGAGGTCTTGAAGTCCAGACAAAATGCTTGTGAAATTACACCCGAGCAAAGCTGGTTGTGCCAAAACAAAAAGAATGTCCCACAAATGAACACAGAACACAAGAACCCATGTAATCCAAGACAAACTCTTGAGAGGAAACAATATGCCAAGAAAGACGGACTTGTGGAATGGAACAAAGACAATGTCTCATCAACACACACAAACAGTCCCAACCTCAAAAGGAAAGAAACAAAAGAAGAGTCTGCAAGAAGTGCAATGCTAAACCTGGCTACTGAAACTAAGACCAACACAAAATCTCATTTTGAAGAGAGCAGCAAGTTATTTAATGCAAAACTGAAAGCATTATCCGGCAGGAGCCAAACTTGGGATGAGAGTAATCGCGGGAGCTCAACAGGAAGCTTGAAAGGTAATTCTAGCTCACCAAGACTTAAAAGCAAGTTCCTCGAGGAGACTGCTTTCATCGATGTGGCCCCTCAAGGCCTTTTAGATGAACAATACTTTCCAGCTCAACACAGCCCGCTTGGTTTTAAAGAAGACTTTGAGGACTTTGTTAGGTGTCGAGCTAGTCAGAGTCTTGGGAGGGTTCCACAGTTCTTCCCCATGCATGACGCCAATGATGCATCCCGGCCATCCAAAAACGGTCACTCTAAGACAACTGCTGTTAATAAATTCATGCCCAGTTCAAAGATCCACAAGATGCCAAACTTGTCCCCCAAACCCACTAGGCACTCGATCAACAGGAGCTCAAGCTTTTCTCCTAATGGAGCATCTGTCAACCAAAGCTCCTGGTCAACACACTCCCTATCCCGAAGTCAAGATAACGGTGGTTTGAAGTCGCCCAGTGCAGTCCGGAAAGGAAGGGTTGAACTTTTAAGAAGCAGTAGAGACTCTCTTTCTGCTTTTAGTCAAGGTGGGTCTGATTTAGATGAAAGTGAGGAACTGGGGATGACGAAACCTTTCGTTCACACGTTGCCATCCCCATACAGTCGGATCACAGCTCCACGGACACCATACCACTGCAGCGGCCATGCTAGTGATACCACCAGTGTTCTCAGTGGAGAGCTGCCTCCTGCCATGTGTAAAACGGCTTTACTCTATAACAGAAGCAGTATGGTCAGTAGTGGCTATGAAAGCATGCTAAGAGACAGTGAGGCTACAATTAGCAGCAGTTCAACGCACAACTCCATCAGCGATCAGAGCTGCTCACTCGGCGCTGCTAAAGGGGCAAGAAGTACCAAGAAAAGAACCAACATAGGATCTAGTGTAAGACACCCATCTCAAGACAACCTCCTTTCTCTGAAGAGATCCGTCAGTGGGCCCAAAATGCACCGGGTGGATCGGGGTGTTTCTGAGTCTTATGAAATAAAAGTCTATGAGATTGATAATGTAGATGGCGTACAGAAGAGAGGTGGGGCAGGGAACAAGGGTATAGTGCTCTTTAGTGCAAAGCTGAAATTCCTGGAGCATCGACAGCAGAGAATAGCAGAGGTGAGACTCAAGTATAATGCTCTCAAGAGGGAGCTGGAACATGCCAAGCATCATCTGATGGTGGACCCTGGAAAATGGACCCGTGAATTTGACTTATGGCAAACGTTTGAGGTAGACTCCCTGGAGCACTTAGAAGCGTTGGAGCTGGTCACTGAACGACTAGAGCGTCATGTTAACCTCTGTAAAGCACATGTCTTGATGGTCACCAGCTTTGATGTTACACCCAATTGCAGACAAAAGTGGCGGCATCGGCCCACTGTAGATCATACAGCGTTTGCAGGAATATAGCATGCCAAGATGTTAAATGATCACTTTGACCTGTTATGCAACATATGAAATGATATGCAAATCTGTGCCTGTAAAGCATCTCAAAATCATCACATTATACAGAAGCTTCCGCTGGTGCTGATCGGGCTCTACTTGAAATCTAATTTGCTGTAAATGTTTGTGTTTTTCGCTTTATTGAGAGAGAGCAAAACAACATAATGGACTGCAGACTTCTGTCTGAACTTGGATGAACTGATGGGCTTTTCTCACTTGAAATCCTCGATTATTCCTTGTTTTTCATTGTTCAGACTTTAATTCTAAGTAGTCAGGATTCAAGATTTCCCATTGTACATTTGTAAATCCTGGGTTAACTTTCCTATTGGCATATTTATCCCTAACCCTATAGCCTACAGCATGAGATGACCTGTAATATAACTGCTTGTCCATCTGTGGAAATGTTCAACATTTTAATGTTTCTCTCTCAAGCATTAATATATGATTTGTTACCTGTTGTTAAACAACTTGTTGTAACATTGTCGCACCTTATTGTTTCACACAATATCTTTTGTGCTTAATATCGCAAGTTGAAAGGTTGTGGTAACTCACTCCTTTTCAAAATTACAAGTGTGAAATAAAAATTTCTTAACCCAGGGTTAAATGTGGCCTTAATTCGGGGATAAATTATGTTACTTTACTGAGAGTTATTATAATAGTCACCTTCAAGGTGGTAAAAGCACTGTAAATAAGTAATTTTTAACACCCAGGGTTTATTTTGTTGCTCTAAGAGCAAAAAAATTTGAAGTTTTATTGTTAAGGTCTTTAATCCTTATGTGTATGCACTAATAAA

Function


GO:

id name namespace
GO:0008574 ATP-dependent microtubule motor activity, plus-end-directed molecular_function

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU537960 lncRNA downstream 28866 10023665 ~ 10193979 (-) False G468702
TU537963 lncRNA downstream 30503 10163813 ~ 10192342 (-) False G468702
TU537932 lncRNA downstream 225275 9996841 ~ 9997570 (-) True G468680
TU537933 lncRNA downstream 253815 9967709 ~ 9969030 (-) True G468681
TU537780 lncRNA downstream 312860 9902600 ~ 9909985 (-) True G468539
TU537952 lncRNA upstream 8247 10255779 ~ 10256848 (-) True G468699
TU537968 lncRNA upstream 9736 10257268 ~ 10268538 (-) True G468705
TU537976 lncRNA upstream 44518 10292050 ~ 10302733 (-) True G468710
TU537977 lncRNA upstream 58927 10306459 ~ 10307849 (-) True G468711
TU538102 lncRNA upstream 104466 10351998 ~ 10352296 (-) True G468828
CI01000325_10200118_10220665.mRNA mRNA downstream 1594 10199979 ~ 10221251 (-) True CI01000325_10200118_10220665
CI01000325_10092490_10094515.mRNA mRNA downstream 128330 10092414 ~ 10094515 (-) True CI01000325_10092490_10094515
CI01000325_10072629_10073699.mRNA mRNA downstream 148434 10072431 ~ 10074411 (-) True CI01000325_10072629_10073699
CI01000325_10057059_10062989.mRNA mRNA downstream 159856 10056146 ~ 10062989 (-) True CI01000325_10057059_10062989
CI01000325_10035815_10039749.mRNA mRNA downstream 180542 10035756 ~ 10042303 (-) True CI01000325_10035815_10039749
CI01000325_10259809_10261986.mRNA mRNA upstream 11941 10259473 ~ 10261986 (-) True CI01000325_10259809_10261986
CI01000325_10330659_10345549.mRNA mRNA upstream 83127 10330659 ~ 10345549 (-) True CI01000325_10330659_10345549
CI01000325_10486953_10491074.mRNA mRNA upstream 238744 10486276 ~ 10491074 (-) True CI01000325_10486953_10491074
TU537962 other downstream 30503 10167099 ~ 10192342 (-) True G468702
TU537690 other downstream 935521 9287209 ~ 9287324 (-) True G468455
TU536859 other downstream 1525262 8679172 ~ 8697583 (-) True G467741
TU536851 other downstream 1651367 8564630 ~ 8568433 (-) True G467737
TU536674 other downstream 2267653 7946345 ~ 7955192 (-) True G467578
TU538097 other upstream 68598 10316130 ~ 10316685 (-) True G468823

Expression Profile



Homologous


species RNA id representative length rna type GC content exon number chromosome id location
zebrafish (Danio rerio) TCONS_00035923 False 5081 mRNA 0.43 11 NC_007131.7 35013434 ~ 35040041 (-)